Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0603 |
Symbol | |
ID | 5321439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 653060 |
End bp | 653554 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640789539 |
Product | UspA domain-containing protein |
Protein accession | YP_001326294 |
Protein GI | 150395827 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.784504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACG GTAAGCTGAG GGAGGCGCCG CATTGGGGTG CGGCGTGGCA ACATAGGAAG GGACGTAATA GCATGTACAA AAAGATCATC GTGCCGATCG CCATGGATCA GCTGGAGCAT GGCGAGTCCG TTCTCGGCAT TGCGGTGAAG CTGATCGATG AAGGGGGAGA GATCATTCTG CTCAATGTCG TCGAGGATCT CAACGCCTAT GCACAAGGCT ATATGATCGT CGATTTTCCG CTGGAGATGA TCGAAGAATC GCGCAAGCAC GCGGTCAAGA CCCTGGAAGC ACTGAGGACC AAGCACGGCA TCAACGGACG CGTGGAAATC CGCACAGGCG GTGCGGCAGG CAGCATCAAC GCCCTTGCAA AGGAAGAGAA TGCCGACCTG GTGATCATCG CGTCGCACCG ACCGGGCTTG ATCGATTACT TCATCGGATC CACCGCCAGC CGCGTCGTCA GCCATTGCCC CTGCGCGGTT CTCATCGATC GGTAA
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Protein sequence | MTDGKLREAP HWGAAWQHRK GRNSMYKKII VPIAMDQLEH GESVLGIAVK LIDEGGEIIL LNVVEDLNAY AQGYMIVDFP LEMIEESRKH AVKTLEALRT KHGINGRVEI RTGGAAGSIN ALAKEENADL VIIASHRPGL IDYFIGSTAS RVVSHCPCAV LIDR
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