Gene Smed_0593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0593 
Symbol 
ID5321429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp640675 
End bp641088 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content62% 
IMG OID640789529 
ProductMerR family transcriptional regulator 
Protein accessionYP_001326284 
Protein GI150395817 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.429444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATACGA TCGGCGATCT TTCCCGTCGG ACGGGCGTAA AAATCCCGAC CATTCGCTAC 
TACGAGCAGA TGGGTCTGCT CGCCGCGCCG GAGCGCACGG AGGGCAATCA GCGGCGCTAT
GAAAAGCGCG CACTCGAACG ACTCGCCTTC GTCCGCCACG CACGCGATCT CGGACTTTCG
ATCGAGGCGA TCCGGGACCT TCTGGCACTG AGCGAGCATC CGGAACGCCC CTGCGGCGAA
GCGGACCGGA TCGCGACCGA GCACCTTGCC TCTGTCCGGG AAAAGATCGC CCAACTTAGA
AAGCTTGAGC ATGAGCTCAA GCGCATCGTC GCCTGTCATG GCGATCACAC GATCGGCGAC
TGCTATGTGA TCCGGGCGCT CGCCGACCAC TCGCTGTGCG GAAACGAGCA TTGA
 
Protein sequence
MYTIGDLSRR TGVKIPTIRY YEQMGLLAAP ERTEGNQRRY EKRALERLAF VRHARDLGLS 
IEAIRDLLAL SEHPERPCGE ADRIATEHLA SVREKIAQLR KLEHELKRIV ACHGDHTIGD
CYVIRALADH SLCGNEH