Gene Smed_0591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0591 
Symbol 
ID5321427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp639016 
End bp639960 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content64% 
IMG OID640789527 
Productgluconate 2-dehydrogenase (acceptor) 
Protein accessionYP_001326282 
Protein GI150395815 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCGAC GTGCAAGGTA TCTGCTTTCT GGTCTGGCTC TGCTGGCGAT AGCGGGAGGC 
GGGCTTGCCT GGTGGTTGAC CAAGCCGGAT CGATCGGATG CGTCGCAGTG GGAAGGTCTC
GGGGACCCCG ATCTTTCCAA TGGCGAACGG GTCTTCTGGG CCGGTGGTTG TGCCAGCTGC
CATGCTGCGC CGGACACCAC GGACAATGGC GCTTCGGACG ATAGCGCGGC AGACGAAAAA
AGGCTCCTGC TAGCCGGAGG CCGCAGCCTG AAGAGCCCCT TCGGCACGTT TTATCCGCCC
AATATCTCGC CCGATGAAAC GGCCGGCATC GGCACCTGGA CGCTCGCGGA GTTCGGCGAC
GCCATGACGC GCGGCGTCGG AAGGGATGGC GGGCATCTCT ATCCGTCCTT TCCCTACGGC
TCCTACATCC GCATGACGGC GAAGGACGTC AATGATCTTT GGGGCTTCAT GCAGACGCTG
CCGAAGAGCG GCAATACGAC GCCGCAGCAC GATCTGGCGT TCCCCTACAA TATTCGCCCG
GCGATCGGCG TGTGGAAGTT CTTCTATCTT ACCGACGAGC CGCGTGCCCG GATAAATACC
GCCGACACCA AGCTCGCCCG CGGCCAGTAC CTCGTGGAGG GGCCCGGCCA TTGCGGCGAA
TGCCACACGC CACGCGATGC GCTTGGCGGC TTCGAGGAGG CGAGATGGCT CACCGGGGCG
CCCAATCCCG AAGGTGAGGG ACGGATCCCC GACATCACGC CGGCTTCGAA AAGCGTCGGC
GGCTGGAGTG CGTCCGACAT CGCCTCCTAT CTCGAAACGG GTTTCACCCC CGATTTCGAT
ACCGTTGGCG GCTCGATGGT CGAGGTGCAG AAGAATATGG CGAAGCTGCC GGCGTCCGAC
AGAGACGCTA TCGCGGCATA CCTCAAGGCG CTGCCGGCGC TCTAA
 
Protein sequence
MGRRARYLLS GLALLAIAGG GLAWWLTKPD RSDASQWEGL GDPDLSNGER VFWAGGCASC 
HAAPDTTDNG ASDDSAADEK RLLLAGGRSL KSPFGTFYPP NISPDETAGI GTWTLAEFGD
AMTRGVGRDG GHLYPSFPYG SYIRMTAKDV NDLWGFMQTL PKSGNTTPQH DLAFPYNIRP
AIGVWKFFYL TDEPRARINT ADTKLARGQY LVEGPGHCGE CHTPRDALGG FEEARWLTGA
PNPEGEGRIP DITPASKSVG GWSASDIASY LETGFTPDFD TVGGSMVEVQ KNMAKLPASD
RDAIAAYLKA LPAL