Gene Smed_0587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0587 
Symbol 
ID5321423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp635936 
End bp636538 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content56% 
IMG OID640789523 
Productsuperoxide dismutase 
Protein accessionYP_001326278 
Protein GI150395811 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTCG AATTGCCGAA CCTTCCCTAT GACTACGATG CGCTCGCACC CTATATGTCG 
CGCGAAACGC TCGAATACCA TCACGACAAG CACCACCTCG CTTACGTGAC GAACGGCAAC
AAGCTCGCCG AGGAAGCCGG TCTTTCCGAT CTTTCGCTGG AAGATATCGT CAAGAAATCC
TACGGCACCA ACCAGCCGTT GTTCAACAAT GCCGGCCAGC ACTACAACCA TGTCCACTTC
TGGAAGTGGA TGAAAAAGGG TGGCGGCGGC ACCAGTCTTC CCGGCAAGCT TGACGCCGCG
ATCAAGTCGG ACCTTGGCGG CTACGACAAG TTCCGCGCCG ATTTTGTTGC TGCCGGTACG
GGCCAGTTCG GCTCCGGCTG GGCCTGGCTT TCGGTAAAGA ACGGCAAGCT GGAAATCTCC
AAGACCCCGA ACGGCGAAAA TCCGCTGGTA CACGGCGCAA CCCCGATCCT GGGCGTCGAT
GTGTGGGAAC ATTCCTATTA CATCGACTAT CGCAACGCGC GCCCGAAATA CCTCGAAGCC
TTCGTCGACA ATCTCATCAA CTGGGATTAC GTCCTCGAAC TGTACGAAGC GGCTGCAAAG
TAA
 
Protein sequence
MAFELPNLPY DYDALAPYMS RETLEYHHDK HHLAYVTNGN KLAEEAGLSD LSLEDIVKKS 
YGTNQPLFNN AGQHYNHVHF WKWMKKGGGG TSLPGKLDAA IKSDLGGYDK FRADFVAAGT
GQFGSGWAWL SVKNGKLEIS KTPNGENPLV HGATPILGVD VWEHSYYIDY RNARPKYLEA
FVDNLINWDY VLELYEAAAK