Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0583 |
Symbol | |
ID | 5321419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 632549 |
End bp | 633100 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640789519 |
Product | hypothetical protein |
Protein accession | YP_001326274 |
Protein GI | 150395807 |
COG category | [R] General function prediction only |
COG ID | [COG5350] Predicted protein tyrosine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCTTG CGGTTCAGGC TCTAGAGAGT ACGCATTTTC AGCCCGTCCT CAGCACGAAT CCGGTGCATC CGAACGGCTG GCCGGTGCGC CTCGTCGTCA GCTCGCAGAC CGAAGCGCGT CACAATCGCG CACTTTGGGC GCCGACGCAC CTCATCTCGA TCCGAGCACC CGGCACGCGC CTGCTTTCGA TGATCGACCT GCCGCCGGAG CGGCATCTGG AACTTCATTT CGGCGACACC ACCGACCCGG ACGCCCCGGA CGCAGCGCCT CTGCAGGCGA TCGAGGCGAC CTTCGCCTTC ATCGACAGCC TGCCCGAAGA TGCCAATCTG CTGATCCATT GCCTCAGAGG TATCGGGCGC TCGACGGCCC TGTCCCTCGG CGTTCTGGCG CGCTACGTAG CGCCGGAAAA AGCTGCGTCT TCGCTTCACG CGCTGCGCCC GGAAGCAAAG CCAAACCGGC ACGTGCTCGG CCTTTGCGAC GCGGCGCTCG GGCTCAAGGG CAAACTTGTG AAACAGGCGC TGCGTTTTCC GGCAAAGGTT TGGAAAGATT GA
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Protein sequence | MALAVQALES THFQPVLSTN PVHPNGWPVR LVVSSQTEAR HNRALWAPTH LISIRAPGTR LLSMIDLPPE RHLELHFGDT TDPDAPDAAP LQAIEATFAF IDSLPEDANL LIHCLRGIGR STALSLGVLA RYVAPEKAAS SLHALRPEAK PNRHVLGLCD AALGLKGKLV KQALRFPAKV WKD
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