Gene Smed_0583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0583 
Symbol 
ID5321419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp632549 
End bp633100 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content64% 
IMG OID640789519 
Producthypothetical protein 
Protein accessionYP_001326274 
Protein GI150395807 
COG category[R] General function prediction only 
COG ID[COG5350] Predicted protein tyrosine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTTG CGGTTCAGGC TCTAGAGAGT ACGCATTTTC AGCCCGTCCT CAGCACGAAT 
CCGGTGCATC CGAACGGCTG GCCGGTGCGC CTCGTCGTCA GCTCGCAGAC CGAAGCGCGT
CACAATCGCG CACTTTGGGC GCCGACGCAC CTCATCTCGA TCCGAGCACC CGGCACGCGC
CTGCTTTCGA TGATCGACCT GCCGCCGGAG CGGCATCTGG AACTTCATTT CGGCGACACC
ACCGACCCGG ACGCCCCGGA CGCAGCGCCT CTGCAGGCGA TCGAGGCGAC CTTCGCCTTC
ATCGACAGCC TGCCCGAAGA TGCCAATCTG CTGATCCATT GCCTCAGAGG TATCGGGCGC
TCGACGGCCC TGTCCCTCGG CGTTCTGGCG CGCTACGTAG CGCCGGAAAA AGCTGCGTCT
TCGCTTCACG CGCTGCGCCC GGAAGCAAAG CCAAACCGGC ACGTGCTCGG CCTTTGCGAC
GCGGCGCTCG GGCTCAAGGG CAAACTTGTG AAACAGGCGC TGCGTTTTCC GGCAAAGGTT
TGGAAAGATT GA
 
Protein sequence
MALAVQALES THFQPVLSTN PVHPNGWPVR LVVSSQTEAR HNRALWAPTH LISIRAPGTR 
LLSMIDLPPE RHLELHFGDT TDPDAPDAAP LQAIEATFAF IDSLPEDANL LIHCLRGIGR
STALSLGVLA RYVAPEKAAS SLHALRPEAK PNRHVLGLCD AALGLKGKLV KQALRFPAKV
WKD