| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0563 |
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| Symbol | |
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| ID | 5321399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 610662 |
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| End bp | 612125 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640789499 |
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| Product | betaine aldehyde dehydrogenase |
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| Protein accession | YP_001326254 |
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| Protein GI | 150395787 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01804] glycine betaine aldehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.886348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.578799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGCCC AACCGAAAGC CTCGCACTTC ATCGACGGCG AATATGTCGA GGACGCCGCC
GGCACGGTGA TCGAAAGCAT CTATCCGGCG ACCGGCGAAG TGATCGCCCG CCTCTATGCT
GCAACGCCCG CAATCGTCGA GAAGGCGATC GCCGCGGCCA AGCGGGCGCA GCCGGAATGG
GCGGCGATGA GCCCGACGGC TCGCGGCCGC ATCCTGAAGC GGGCCGCCGA GATCATGCGC
GAGCGCAACC GGGAGCTCTC CGAACTAGAG ACGCTCGACA CGGGCAAGCC CATCCAGGAA
ACCATCGTCG CCGACCCGAC CTCGGGCGCC GACAGCTTCG AGTTCTTCGG GGGTATCGCC
CCGGCCGCCC TCAATGGCGA TTATATCCCG CTCGGCGGCG ATTTCGCCTA TACGAAGCGG
GTACCTCTCG GCGTCTGTGT CGGCATCGGC GCCTGGAACT ATCCGCAGCA GATCGCCTGT
TGGAAGGGTG CGCCTGCCCT CGTCGCCGGC AATTCGATGG TGTTCAAGCC GTCGGAGAAC
ACGCCTCTCG GCGCGCTGAA GATCGCCGAA ATCCTGATCG AAGCGGGTCT GCCGAAGGGC
CTGTACAACG TCGTTCAGGG CGACCGATCG ACTGGACCCC TCCTCGTCAA TCATCCTGAC
GTCGCCAAGG TATCGCTGAC CGGCTCGGTG CCGACCGGCC GCAAGGTCTA TGAGGCGGCC
GCGGCCGGAC TTCGCCACGT CACGATGGAG CTCGGGGGCA AGTCGCCGCT GATCGTCTTC
GACGATGCCG ATCTCGAAAG CGCGATCGGC GGCGCCATGC TCGGCAATTT CTATTCGACC
GGTCAGGTCT GCTCCAACGG CACGCGCGTC TTCGTTCAGA AGAAGATAAA GCAATCCTTC
CTGGCGCGGC TGAAGGAGCG TACCGATGCG ATCGTCATCG GGGACCCGAT GGACGAGGCG
ACGCAGCTCG GGCCGATGGT ATCCACGGCG CAGCGTGACA AGGTCTTCTC TTATATCGAG
AAAGGCAAAT CGGAGGGCGC GCGGCTCGTG ACCGGCGGCG GCATCCCCAA CAATGTGAGC
GCCGAAGGCA CCTATATCCA GCCGACGGTC TTTGCCGATG TCACCGACGA GATGACCATC
GCGCGCGAAG AAATCTTCGG CCCGGTCATG TGCGTGCTTG ATTTCGATGA CGAGGCGGAG
GTCGTCGCAC GCGCCAACGC CACCGAATTC GGCCTCTCCG CCGGCGTCTT CACCGCCGAC
CTCACCCGCG CCCATCGCGT CGTCGACCGG CTGGAGGCCG GAACGCTCTG GATCAACACC
TATAATCTCT GCCCGGTCGA GATTCCGTTC GGCGGATCCA AGCAGTCCGG CTTCGGGCGC
GAGAATTCAG CCGAAGCGCT CAAACACTAT ACCGAGCTCA AGACCGTCTA TGTCGGCATG
GGACCGGTCG AGGCGCCGTA TTGA
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| Protein sequence | MRAQPKASHF IDGEYVEDAA GTVIESIYPA TGEVIARLYA ATPAIVEKAI AAAKRAQPEW
AAMSPTARGR ILKRAAEIMR ERNRELSELE TLDTGKPIQE TIVADPTSGA DSFEFFGGIA
PAALNGDYIP LGGDFAYTKR VPLGVCVGIG AWNYPQQIAC WKGAPALVAG NSMVFKPSEN
TPLGALKIAE ILIEAGLPKG LYNVVQGDRS TGPLLVNHPD VAKVSLTGSV PTGRKVYEAA
AAGLRHVTME LGGKSPLIVF DDADLESAIG GAMLGNFYST GQVCSNGTRV FVQKKIKQSF
LARLKERTDA IVIGDPMDEA TQLGPMVSTA QRDKVFSYIE KGKSEGARLV TGGGIPNNVS
AEGTYIQPTV FADVTDEMTI AREEIFGPVM CVLDFDDEAE VVARANATEF GLSAGVFTAD
LTRAHRVVDR LEAGTLWINT YNLCPVEIPF GGSKQSGFGR ENSAEALKHY TELKTVYVGM
GPVEAPY
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