Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0540 |
Symbol | |
ID | 5321374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 583643 |
End bp | 584326 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640789474 |
Product | regulatory protein ArsR |
Protein accession | YP_001326231 |
Protein GI | 150395764 |
COG category | [K] Transcription |
COG ID | [COG0640] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.60419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.57949 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGAAG GTCCGGACAT AGCTTTGATC GGTTCGTTGA TCGGCGATCC TGCGCGCGCG AATATGCTGA CCGCCCTGAT GGGCGGCCAG GCGCTGACAG CGACCGAGCT TGCGGCACAA GCCGGCGTCA CGCTGCAGAC GGCCAGCTCG CACCTGGCCA AGCTGGAGGC GGGCGGCCTG CTGACTCAGC GAAAACAGGG CCGGCACCGC TATTATGCCC TGAGCGAGGA CGAGGTCGGC CTGATGCTCG AGAGCCTTAT GGGTTTCGCC GCCGGAAAAG GTCTGACGCG GTCGCGGCCC GGACCGAAGG ACCCGGCGCT GCGTAAAGCG CGTGTCTGCT ACAACCATCT CGCTGGCGAT TATGGCGTGC GGATGCTGGA CAGCCTGATC GCCGCCAGGC AAATCGAAAT GACAGATGAC GACGATCTGG CGCTGACCGA TGCGGGGCGG ATCCGCGTCG AGTCGCTCGG GGTCGACTAC GCCGCGCTCA GGAAATCCCG TCGGCCTATC TGCCGCACCT GTCTCGACTG GAGTGAACGG CGGTCGCATC TGGCCGGTTC GCTCGGAGAG GCACTGCTGA CGCTCTTCAT TGAAAACGGC TGGGCGAAAC GGGAGCAGAA CAGCCGGGCG ATCCTCTTCA CGGCGGCGGG CGAAAAGGCG TTTCTTGAAC TCTTTCCCCG ATGA
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Protein sequence | MKEGPDIALI GSLIGDPARA NMLTALMGGQ ALTATELAAQ AGVTLQTASS HLAKLEAGGL LTQRKQGRHR YYALSEDEVG LMLESLMGFA AGKGLTRSRP GPKDPALRKA RVCYNHLAGD YGVRMLDSLI AARQIEMTDD DDLALTDAGR IRVESLGVDY AALRKSRRPI CRTCLDWSER RSHLAGSLGE ALLTLFIENG WAKREQNSRA ILFTAAGEKA FLELFPR
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