Gene Smed_0534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0534 
Symbol 
ID5321368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp576848 
End bp577459 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content58% 
IMG OID640789468 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001326225 
Protein GI150395758 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.700744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.612185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGAT CGGTTTTTCG GTTCCTGTCG CGGCAGCCGG AGACGGTCGA GATCGCCAGC 
CAGCATTATC TGCTCCGTCT CCCCCGCTAC GCCGACTATC GGCAGTGGTA TCGGTTGCGC
AGCGAAAGTC GCGCCTTCCT GGAGCCCTGG GAACCCACCT GGCGCGCCGA CGAAATGACC
GAAGGCGCCT TTCGCAGCCG CGTCAATCGT AATGAGCAGG AATTTGCTTC CGGCCAGGCC
GTGCCGCTTT TTCTCTTCCA CAGGCCGGAC GAAGAACTGC TGGGGGGACT CACCATCGGC
CATATCCGCC GCGGTGCCGC GCAGAACTGC ATGATCGGCT ACTGGATGGG TCAGAAACAT
GCCGGCCAAG GCCATATGTA CGAGGCCTTG AAGCTGACCA TTCCCTACAT CTTCTCGGGC
CTCGAGTTGC ACCGTATCGA AGCAGCCTGT ATTCCGGATA ACGCACGGAG CATCCGGCTC
CTTGAAAAGG CCGGCTTTGA GCGTGAAGGC TATTTGAGAC AATATTTGAA GATAAACGGG
CAGTGGCGGG ACCATTTGAT GTTCTCGCTT CTCTCCGTCG ATGCTGCACC CAACAGGAAT
TTGCCCCTTT GA
 
Protein sequence
MTRSVFRFLS RQPETVEIAS QHYLLRLPRY ADYRQWYRLR SESRAFLEPW EPTWRADEMT 
EGAFRSRVNR NEQEFASGQA VPLFLFHRPD EELLGGLTIG HIRRGAAQNC MIGYWMGQKH
AGQGHMYEAL KLTIPYIFSG LELHRIEAAC IPDNARSIRL LEKAGFEREG YLRQYLKING
QWRDHLMFSL LSVDAAPNRN LPL