Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0502 |
Symbol | |
ID | 5321336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 545337 |
End bp | 545942 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789436 |
Product | cobalt transport protein |
Protein accession | YP_001326193 |
Protein GI | 150395726 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.13818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACAA GTCTCTATGT CGAGGGGGAA AGCTGGTTTC ACCGCATACC GGTGCGCGTC AAGCTCGTGG CACTCGTCGC CTTAAGCGTC GCGCTCTTTG CGACGGACTC GCCCTTTCTG CTGCTTCCGG CCTTTCTCCT CAGCGGCTGG CTCTATCTCA CTCTGGGGCT GCCGCTGCGC GAAGCGCTGT CGCGCGTCGG CTTCGTCTTC TTCACCATTC TGTTTCTTGC CGCAGTCAAT CTGTTCCTCG TTCCCGTCCC GCAGGTTGCC GCGCTTGTCT TGCGGCTGAT GGCGCTCGTG CTATTTGCCG CCGCGGTTAC GGCGACCACG ACGATCGGCG CTTTCATGGA CGAGGTAACA GTCCTTTTGA GGCCTTTGGA GCGGTTAGGC CTGCTAAGGG CGGCAGATGT CGGCCTGGCG CTTGGGCTCG TGTTGCGCTT CGTCCCCGAC ATCTTCGCCC GATATCAGGC ACTCGCCGAA GCGCACCGCG CGCGTGGGCT TCCGCTGCGG CCATTGACCA TCATCGGTCC GCTGATCATC CTGACGCTCA GAGATGCGGA CACGATCGCG GCCGCCATTG ACGCGCGGGG ATTTCGCCGT CAATGA
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Protein sequence | MLTSLYVEGE SWFHRIPVRV KLVALVALSV ALFATDSPFL LLPAFLLSGW LYLTLGLPLR EALSRVGFVF FTILFLAAVN LFLVPVPQVA ALVLRLMALV LFAAAVTATT TIGAFMDEVT VLLRPLERLG LLRAADVGLA LGLVLRFVPD IFARYQALAE AHRARGLPLR PLTIIGPLII LTLRDADTIA AAIDARGFRR Q
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