Gene Smed_0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0502 
Symbol 
ID5321336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp545337 
End bp545942 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content62% 
IMG OID640789436 
Productcobalt transport protein 
Protein accessionYP_001326193 
Protein GI150395726 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.13818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACAA GTCTCTATGT CGAGGGGGAA AGCTGGTTTC ACCGCATACC GGTGCGCGTC 
AAGCTCGTGG CACTCGTCGC CTTAAGCGTC GCGCTCTTTG CGACGGACTC GCCCTTTCTG
CTGCTTCCGG CCTTTCTCCT CAGCGGCTGG CTCTATCTCA CTCTGGGGCT GCCGCTGCGC
GAAGCGCTGT CGCGCGTCGG CTTCGTCTTC TTCACCATTC TGTTTCTTGC CGCAGTCAAT
CTGTTCCTCG TTCCCGTCCC GCAGGTTGCC GCGCTTGTCT TGCGGCTGAT GGCGCTCGTG
CTATTTGCCG CCGCGGTTAC GGCGACCACG ACGATCGGCG CTTTCATGGA CGAGGTAACA
GTCCTTTTGA GGCCTTTGGA GCGGTTAGGC CTGCTAAGGG CGGCAGATGT CGGCCTGGCG
CTTGGGCTCG TGTTGCGCTT CGTCCCCGAC ATCTTCGCCC GATATCAGGC ACTCGCCGAA
GCGCACCGCG CGCGTGGGCT TCCGCTGCGG CCATTGACCA TCATCGGTCC GCTGATCATC
CTGACGCTCA GAGATGCGGA CACGATCGCG GCCGCCATTG ACGCGCGGGG ATTTCGCCGT
CAATGA
 
Protein sequence
MLTSLYVEGE SWFHRIPVRV KLVALVALSV ALFATDSPFL LLPAFLLSGW LYLTLGLPLR 
EALSRVGFVF FTILFLAAVN LFLVPVPQVA ALVLRLMALV LFAAAVTATT TIGAFMDEVT
VLLRPLERLG LLRAADVGLA LGLVLRFVPD IFARYQALAE AHRARGLPLR PLTIIGPLII
LTLRDADTIA AAIDARGFRR Q