Gene Smed_0497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0497 
Symbol 
ID5321331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp540693 
End bp541661 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content66% 
IMG OID640789431 
Productalcohol dehydrogenase 
Protein accessionYP_001326188 
Protein GI150395721 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.382641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCCA CTCTCGTTAG ACAGTTTGGC GAACCCGAAC AAGTCATCGA ACTCGTGGAA 
GCACCTCGCG CTGCTCCGCG TGCGGGCGAG GTCGAGGTCG AGATATCGCT CGCGGCAATC
AACCCTTCGG ATCTGATCCC CGTCACGGGC GCCTACAGCG CGCGAACCAC GCTGCCCTTT
GTCCCGGGCT TCGAGGGCGT CGGCATCGTC AGACGGGTCG GGGCCGATGT GCGGGATTTC
AAGCCCGGCG ACCGGGTCGT TCCTATCGGT GCGAGCGGGC TATGGCAGCA GTTTGTCCTT
CGACCGGGTG AGTGGTGCTT TCGCGTGCCG GACGATATCG CGGATGCGCA GGCGGCAATG
AGCTACGTCA ACCCCTTGAC GGCACTCAGG CTCGTGGAGG CGCTCCGCAC GCATTTCGGC
TCGCTGCAAG GCATCGAGGT CGGCGTCACC GCGGCGGGAT CGGCCATAGG CGGCATGCTG
GTAAAGTTGC TTGCGCTCCA AGGTGCGGTG CCAACCGCCA TGCTTCGCAG CGAAAAGACC
CGCGTCCGTC TTGGTCAGGC ACACCGGGTC GTGGTGGCCG AGGTCGGCGA TCTCCCCTCA
GGCAGCCAAT TCGACGCGGT GCTGGATGCC GTCGGCGGCA CGCCGGCGGG CGAACTGATC
AGGCACTCCA TTCGTCCCGG CGGGACCTTC ATCCAATATG GTGCGCTCAG CGGCATTCCG
GTGCCGCCGG CGGCGATCGG CGACAGGCCG GACGTCCGCT TTGATTTTCT CTGGCTCAGA
ACCTGGGTGC ATTCCGCTGG CCGCGATGCG CTTGAGGCCG CCTTCCTCCG CAGTTTTGCG
GGACTGCAGA GCGGCCTCTT CGCAAGCCTC GTCGCCGCAA CCTACCCCCT CAGCCGGCTT
GCCGATGCCC TGGCACATCA GGCCGACCCA GGCCGCGACG GCAAGATCCT GCTCGATCCG
CGCTGTTGA
 
Protein sequence
MRSTLVRQFG EPEQVIELVE APRAAPRAGE VEVEISLAAI NPSDLIPVTG AYSARTTLPF 
VPGFEGVGIV RRVGADVRDF KPGDRVVPIG ASGLWQQFVL RPGEWCFRVP DDIADAQAAM
SYVNPLTALR LVEALRTHFG SLQGIEVGVT AAGSAIGGML VKLLALQGAV PTAMLRSEKT
RVRLGQAHRV VVAEVGDLPS GSQFDAVLDA VGGTPAGELI RHSIRPGGTF IQYGALSGIP
VPPAAIGDRP DVRFDFLWLR TWVHSAGRDA LEAAFLRSFA GLQSGLFASL VAATYPLSRL
ADALAHQADP GRDGKILLDP RC