Gene Smed_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0478 
Symbol 
ID5321312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp517158 
End bp517724 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content63% 
IMG OID640789413 
Producthypothetical protein 
Protein accessionYP_001326170 
Protein GI150395703 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.160415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAATT CACTCTCTCA ACCGGCATGG GTCGAAAACA CGCTCAGACT TGACCCGAAG 
CGATTTCCGC AGCAAGCAAG CTACGTGTTG CGCGGCCACA CGGGGAATGT CAGCATCAGC
CTTGACGAGC GTGGCGCTGT TCTGCGCAAG GTGCTACCAT CCAGCGGCCT GCCGCTTTCG
ATCGCTCTAC CGGCGCGAGC TTTCAAGGGC GTGGCGGCGC GGGCGATAGA CCATGGCGAC
GGGGAGGTTA CAGTGACGCT CGAACTCCAT CACGATGATC CGGATCTCTG CATTCCGCTG
CTCGTGGCTC ATGATCTCTC CGACATCGCG GCCGACTGGC GTGCCTGGGC CGATGCCTAT
CGCGTCCCGA TGCTCATGGT GGAAGCAGAC GGGGTCGCAC GGCCGCTCGA GGAGCATATA
GGCGATGTCC GCGCCGCTCA GGCGAAGCCG CGCCGTCGTC ACTCATTTTT TGCCGAGCGC
CGGCCGCGAT TCCTCGTGCG CCGCTCCACC GGCAGTCTCG GTATCCAGAT GAAGATCGAC
GGACGCGAAA TCATCGCACG GGCCTGA
 
Protein sequence
MRNSLSQPAW VENTLRLDPK RFPQQASYVL RGHTGNVSIS LDERGAVLRK VLPSSGLPLS 
IALPARAFKG VAARAIDHGD GEVTVTLELH HDDPDLCIPL LVAHDLSDIA ADWRAWADAY
RVPMLMVEAD GVARPLEEHI GDVRAAQAKP RRRHSFFAER RPRFLVRRST GSLGIQMKID
GREIIARA