Gene Smed_0450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0450 
Symbol 
ID5321284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp486973 
End bp487458 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content60% 
IMG OID640789385 
ProductF0F1 ATP synthase subunit B 
Protein accessionYP_001326142 
Protein GI150395675 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.292489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.116095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTTG ATGCGACTTT CTATGCCCTC GTAGGTCTGA TTCTCTTCTT TGTCCTGATC 
GCCTACCTCA AGGTTCCTGG GATGGTCGGC AAGGCGCTTG ACGCGCGCGC CGACAAGATC
AGCAATGAGC TGGCGGAAGC CAAGCGCCTG CGTGAAGAGG CACAGAGCCT CGTGGCCGAG
TACCAGCGCA AGCGCAAGGA TGCCGAAGCC GAAGCCGCGA GCATTGTCGC CGCGGCCCAG
CGCGAAGCGG AAATGCTGAC GGCAGAGGCC AAGCAGAAGA CGGAGGAATT TGTCGCACGT
CGCACGGCAC TTTCCGAACA GAAGATCAAG CAGGCCGAAA GCGATGCGAT CAATGCCGTT
CGCGCTGCTG CCGTAGACCT GGCAATCAGC GCAGCCGAAA AGGTGATTGC GAGCAAGGCG
GATGCCAGTG CCCAGGAAAC GCTCTTCCAG AAGGCTCTCG GCGAGGTAAA GTCCCGCCTG
AACTGA
 
Protein sequence
MALDATFYAL VGLILFFVLI AYLKVPGMVG KALDARADKI SNELAEAKRL REEAQSLVAE 
YQRKRKDAEA EAASIVAAAQ REAEMLTAEA KQKTEEFVAR RTALSEQKIK QAESDAINAV
RAAAVDLAIS AAEKVIASKA DASAQETLFQ KALGEVKSRL N