Gene Smed_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0405 
SymbolhisG 
ID5321239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp435408 
End bp436103 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content63% 
IMG OID640789340 
ProductATP phosphoribosyltransferase catalytic subunit 
Protein accessionYP_001326097 
Protein GI150395630 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0040] ATP phosphoribosyltransferase 
TIGRFAM ID[TIGR00070] ATP phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.417772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0711968 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCA CTATTGCGCT GCCCTCAAAG GGGCGGATGA AGGATGAGTC CTCGGCTATT 
TTCGAACGCG CCGGCATGAG GATCACGGCG GTTGGCAACG ACCGATCGTA TCGCGGCCGC
GTGGAAGGCG TGGAAGACGT CGAGATAACC TTTTTGTCGG CCTCGGAAAT CGCGCGTGAA
ATCGGCAGCG GCGCAGTGGA TTTCGGCGTT ACGGGAGAGG ACCTCGTGCG AGAAGGCCTG
GCGGATGCCG ATGCACGCGT CGAGTTTGCC GCCAGGCTTG GTTTCGGCCA TGCCGATGTG
GTCGTCGCGG TACCCGAAAT CTGGTACGAC GTCGACACCA TGGCTGACCT CGGCGACGTC
GCCGCAGATT TCCGCGCGCG CCACGGCCGG CGCCTCGCCA TCGCTACCAA ATACTGGCGC
CTGACGCAGC AATTCTTCTC GGGCAGCCAC GGCATTCAGC TCTATCGGAT CGTCGAGAGT
CTGGGAGCGA CCGAGGGTGC GCCGGCATCC GGCTCAGCCG ACATCATCGT CGACATCACC
TCGACCGGCT CGACGCTCAA GGCCAACCAT CTGAAGATTC TCTCCGATGG CGTGATCCTT
CGCTCAGAGG CCTGCCTCGT ACGGGCGCGA AAGGCGGAGC ATGGGGGCAA TCCACTGATC
GACCGGATTC TCGCGGCCGT ACGTTCTGCG CTTTGA
 
Protein sequence
MTVTIALPSK GRMKDESSAI FERAGMRITA VGNDRSYRGR VEGVEDVEIT FLSASEIARE 
IGSGAVDFGV TGEDLVREGL ADADARVEFA ARLGFGHADV VVAVPEIWYD VDTMADLGDV
AADFRARHGR RLAIATKYWR LTQQFFSGSH GIQLYRIVES LGATEGAPAS GSADIIVDIT
STGSTLKANH LKILSDGVIL RSEACLVRAR KAEHGGNPLI DRILAAVRSA L