Gene Smed_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0396 
Symbol 
ID5321230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp425463 
End bp426755 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content64% 
IMG OID640789331 
Producthypothetical protein 
Protein accessionYP_001326088 
Protein GI150395621 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.165591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.189703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGACCA ATTTCTCCCC TGAGCAACTC GCCGACCCGC ATGTCGCCGA ATCCGAAACG 
ATTCTGCGCA AATGCGTGCA TTGCGGCTTC TGCACGGCCA CCTGTCCTAC CTATGTGGTT
CTTGGCGACG AACTGGACAG TCCGCGCGGA CGGATTTACC TGATCAAGGA CATGCTCGAA
AACGGCCGTG CCGCGGATAC CGAAACCGTT ACCCATATCG ACCGCTGTCT GTCGTGTCTT
TCCTGCATGA CCACCTGTCC CTCGGGCGTC GACTATATGC ATCTCGTCGA CCATGCCCGC
GTTCACATCG AGAAGACGTA TAAGCGGCCG TTCAAGGATC GGCTCGCCCG TTCCGTCATT
GCCGCGACGC TTCCCTATCC GTCCCGCTTC CGGCTGGCCC TCGGGGCCGC GGGTCTTGCA
CGGCCGCTTG CCGGATTGCT GAAAAGGGTG CCCTTTCTCA GGACATTCGG CATCATGCTG
GATCTGGCGC CGGCCGCGCT ACCGGTATCG CGGGCGGCAA GGCCGGCTGT CTACGCTGCA
AAGGGCACGC CGCGCGCGCG CGTCGCCTTG CTGACCGGTT GCGCTCAGCC GGTGCTGCGG
CCGGAGATCA ACGATGCGAC CATCCGTCTC CTCACCGGAC AAGGCGTCGA GGTGGTTGTT
TCGGCGGGAG AGGGCTGTTG CGGAGCGCTC GTCCATCACA TGGGACGGGA GGAGCAGGCG
CTGCAGGCCG CCCGGCACAA CGTCGATGTA TGGCTCAAGG TGGCGGAGGA GGATGGCCTC
GACGCAATCA TCGTCACCGC TTCCGGCTGT GGCACCACGA TAAAGGATTA CGGTCACATG
CTGCGGCTCG ACCCGACCTA TGCGGAGAAG GCCGCGCGCG TTTCCGCACT GGCGAAGGAC
GTGACCGAAT ATCTCGCGAC CCTCGACCTG CCGGAGCGCG AGCCGCGTGG CCTTACGGTC
GCCTATCACT CCGCCTGCTC GATGCAGCAC GGACAGAGGA TCGCCGCGGC CCCGAAGCAG
CTCCTGAAAC GCGCCGGCTT CTCGGTGCGC GAGCCGGCCG AGGGCCATCT CTGTTGCGGC
TCGGCCGGGA CCTACAACAT CCTGCAGCCG GAGATATCTG CGAAGCTGAA GGCGCGGAAG
GTCCGGAACA TTGAGGCGAC CAGGGCCGAC GTCATCGCCA CCGGCAATAT CGGCTGTATC
ACGCAGATCG CCAGCGGGAC GGAGATCCCG ATCCTGCACA CGGTGGAACT GCTCGATTGG
GCCTATGGCG GCTCGAAACC GGTGGGGCTC TGA
 
Protein sequence
MQTNFSPEQL ADPHVAESET ILRKCVHCGF CTATCPTYVV LGDELDSPRG RIYLIKDMLE 
NGRAADTETV THIDRCLSCL SCMTTCPSGV DYMHLVDHAR VHIEKTYKRP FKDRLARSVI
AATLPYPSRF RLALGAAGLA RPLAGLLKRV PFLRTFGIML DLAPAALPVS RAARPAVYAA
KGTPRARVAL LTGCAQPVLR PEINDATIRL LTGQGVEVVV SAGEGCCGAL VHHMGREEQA
LQAARHNVDV WLKVAEEDGL DAIIVTASGC GTTIKDYGHM LRLDPTYAEK AARVSALAKD
VTEYLATLDL PEREPRGLTV AYHSACSMQH GQRIAAAPKQ LLKRAGFSVR EPAEGHLCCG
SAGTYNILQP EISAKLKARK VRNIEATRAD VIATGNIGCI TQIASGTEIP ILHTVELLDW
AYGGSKPVGL