Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0396 |
Symbol | |
ID | 5321230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 425463 |
End bp | 426755 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640789331 |
Product | hypothetical protein |
Protein accession | YP_001326088 |
Protein GI | 150395621 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.165591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.189703 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAGACCA ATTTCTCCCC TGAGCAACTC GCCGACCCGC ATGTCGCCGA ATCCGAAACG ATTCTGCGCA AATGCGTGCA TTGCGGCTTC TGCACGGCCA CCTGTCCTAC CTATGTGGTT CTTGGCGACG AACTGGACAG TCCGCGCGGA CGGATTTACC TGATCAAGGA CATGCTCGAA AACGGCCGTG CCGCGGATAC CGAAACCGTT ACCCATATCG ACCGCTGTCT GTCGTGTCTT TCCTGCATGA CCACCTGTCC CTCGGGCGTC GACTATATGC ATCTCGTCGA CCATGCCCGC GTTCACATCG AGAAGACGTA TAAGCGGCCG TTCAAGGATC GGCTCGCCCG TTCCGTCATT GCCGCGACGC TTCCCTATCC GTCCCGCTTC CGGCTGGCCC TCGGGGCCGC GGGTCTTGCA CGGCCGCTTG CCGGATTGCT GAAAAGGGTG CCCTTTCTCA GGACATTCGG CATCATGCTG GATCTGGCGC CGGCCGCGCT ACCGGTATCG CGGGCGGCAA GGCCGGCTGT CTACGCTGCA AAGGGCACGC CGCGCGCGCG CGTCGCCTTG CTGACCGGTT GCGCTCAGCC GGTGCTGCGG CCGGAGATCA ACGATGCGAC CATCCGTCTC CTCACCGGAC AAGGCGTCGA GGTGGTTGTT TCGGCGGGAG AGGGCTGTTG CGGAGCGCTC GTCCATCACA TGGGACGGGA GGAGCAGGCG CTGCAGGCCG CCCGGCACAA CGTCGATGTA TGGCTCAAGG TGGCGGAGGA GGATGGCCTC GACGCAATCA TCGTCACCGC TTCCGGCTGT GGCACCACGA TAAAGGATTA CGGTCACATG CTGCGGCTCG ACCCGACCTA TGCGGAGAAG GCCGCGCGCG TTTCCGCACT GGCGAAGGAC GTGACCGAAT ATCTCGCGAC CCTCGACCTG CCGGAGCGCG AGCCGCGTGG CCTTACGGTC GCCTATCACT CCGCCTGCTC GATGCAGCAC GGACAGAGGA TCGCCGCGGC CCCGAAGCAG CTCCTGAAAC GCGCCGGCTT CTCGGTGCGC GAGCCGGCCG AGGGCCATCT CTGTTGCGGC TCGGCCGGGA CCTACAACAT CCTGCAGCCG GAGATATCTG CGAAGCTGAA GGCGCGGAAG GTCCGGAACA TTGAGGCGAC CAGGGCCGAC GTCATCGCCA CCGGCAATAT CGGCTGTATC ACGCAGATCG CCAGCGGGAC GGAGATCCCG ATCCTGCACA CGGTGGAACT GCTCGATTGG GCCTATGGCG GCTCGAAACC GGTGGGGCTC TGA
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Protein sequence | MQTNFSPEQL ADPHVAESET ILRKCVHCGF CTATCPTYVV LGDELDSPRG RIYLIKDMLE NGRAADTETV THIDRCLSCL SCMTTCPSGV DYMHLVDHAR VHIEKTYKRP FKDRLARSVI AATLPYPSRF RLALGAAGLA RPLAGLLKRV PFLRTFGIML DLAPAALPVS RAARPAVYAA KGTPRARVAL LTGCAQPVLR PEINDATIRL LTGQGVEVVV SAGEGCCGAL VHHMGREEQA LQAARHNVDV WLKVAEEDGL DAIIVTASGC GTTIKDYGHM LRLDPTYAEK AARVSALAKD VTEYLATLDL PEREPRGLTV AYHSACSMQH GQRIAAAPKQ LLKRAGFSVR EPAEGHLCCG SAGTYNILQP EISAKLKARK VRNIEATRAD VIATGNIGCI TQIASGTEIP ILHTVELLDW AYGGSKPVGL
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