Gene Smed_0380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0380 
Symbol 
ID5321214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp407887 
End bp408303 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content61% 
IMG OID640789315 
Producthypothetical protein 
Protein accessionYP_001326072 
Protein GI150395605 
COG category[S] Function unknown 
COG ID[COG5331] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.296142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGCT TTGAAATCTT CTGGCCGATG GTGGCCCATG TCGCGCTTGT TTTCGCGCTC 
TATGCGCTCC TCTCCGCCCG TCGGGTTGCG CTCGTCAAGG CGGGGAAGAT CGAGGCTTCC
GTATTCCGGG AAAACCGCGA CGAGCCGGAC GAGAGCCTCG TTGTGCGAAA CAGCATCGCG
AACCAGTTCG AGTTGCCGGT GCTGTTCCAC CTCTGCTGTG TGCTGCTTTA CGTGACCGAG
GCAGACAACA TTCTCTCGCT TGGTCTCGCC TGGCTCTTCG TGGCGCTCCG CTACGCGCAC
GCGGTAATCC ATGTCACCGG CAATCGGCTG CGTTATCGCC GGCCGCTCTT CATGGCGGGG
TTCCTTGTGC TCGTCGCGAT GTGGACCTGG CTTTCCGTCT GGATGGCGAT GAGCTGA
 
Protein sequence
MTGFEIFWPM VAHVALVFAL YALLSARRVA LVKAGKIEAS VFRENRDEPD ESLVVRNSIA 
NQFELPVLFH LCCVLLYVTE ADNILSLGLA WLFVALRYAH AVIHVTGNRL RYRRPLFMAG
FLVLVAMWTW LSVWMAMS