| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0371 |
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| Symbol | |
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| ID | 5321204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 395655 |
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| End bp | 397283 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640789305 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001326063 |
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| Protein GI | 150395596 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.33687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCAGA ATAAGCCTGA CCTAAAGCGA CATGAAAATC CGGCACCAAC ACATCATGAG
GTTTCAGACG ATTTTGACTT TATCGTATGT GGAGCCGGCT CCAGTGGTTC AGTCATTGCC
GCTCGACTGG CACAATGCGG AAGCGCCCGC GTCTTGCTTC TTGAGGCAGG CGGCGATGAC
GTAGCCGAGT CTGTTAGAGA CCCGGCCCAA TGGCCACTCA ATCTCGGCAC GAGCCGTGAC
TGGGGTTTCG TTGGAGAGCC GGCGCCTGAG CTCTACGGTA GGCGGCTACC TCTCAGCATG
GGCAAGGGTT TGGGCGGCGG ATCGAGCATC AACGTGATGG TCTGGGCGCG GGGCCACATG
GAAGACTGGA ATTATTTCGC TGCCGAAGCG GGCGATGAAG CCTGGGGCTA TGAATCGGTT
CTCGGTTACT ATCGGCGAAT TGAAGACTGG CGCGGCACGC CAGATACTGT ACGCCGCGGC
GCTGGAGGGC CGGTATATGT CGCCCAGCCA CGTTCGCCGC AGCCTATCGC AGAGGCTTTG
CTGAACGCTG CGTCGGCGAT AGGAATTCCG GTATTCGACA CTCCAAACGG CGAACTGATG
GAAAGTGGAG GAGGTGCATC GATCGCAGAA CTGCGCATCC GGGATGGCAA GCGGGAGTCC
GTATTCGGAT CTTATGTTCG TCCGCTCATG TCACGACCAA ACCTAACGGT CCTAACCGAC
GCGTTGGTCA CGCGCATCAT CTTCGATGGC ATACGGGCGA CAGGCGTCGA CGTTCTCGTC
AACGGTCAAC GGTGCGCGTT CACTGCGCGA TGCGAAACGG TATTGTCGCT GGGTGCTATC
AACACGCCAA AGGTGCTGAT GCAGTCAGGC ATTGGCCCGA GGGACGAGCT GAAGGCCCAC
GGGATATCTG TCGTGCAGCA TCTTCCGGGT GTGGGTCGAA ACCATCAGGA TCATCTCGCG
TTCGGCTGCA CGTGGGCATA TCGAAAGCCG GAAGGCATCG GCGGGGGAGG CTGCGAAGCA
AAACTCTATT GGAAAAGCGA CTCCCGCCTC TCTCAGCCGG ACATTCTTCA GTGCCAGTTG
GAGTTCGCCG TACCTTCGCC GGTGGAGACA GGTCTGGAAA CCCCGGCGCA TGGCTGGACG
ATGTTTTCAG GGCTTGCGCA GCCGAAAAGC CGTGGCCGGC TGAGGCTCTC CGGCCCCAAT
ACAAACGACC CTATCCTGAT TGAACCAAAC TCTCTCAGTG AGCCGGAAGA CGTGGCTGCA
GCCTTGGCAG CGGTTGAGCT GTGTCGCGAA CTCGGAAATA GCGACGCCTT CACGCCGCTG
GTCGCGTGCG AAGCAGTGCC GGGCACGCGA GACCGGGCAG GGATGATCGA TTTCATCCGA
AAGTCGGCCG TCACTTACTG GCACCAGTCC TGCACGGCCA AAATGGGACG CGACAGCATG
TCCGTGGTCA ATAACGAGCT CAAGGTCTAC GGGGTTGAAA GTCTTCGTAT CGCAGATGCC
TCTATCATGC CGCGTATCAC CACCGGAAAC ACGATGGCAC CGTGTGTCGT CATCGGAGAG
CGCGCAGGCG ATTTGATCAG AAAGACGCAT GGTCTTGCTG ACTCGAGTGG TGTCGCTCCA
TTCGCCTGA
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| Protein sequence | MDQNKPDLKR HENPAPTHHE VSDDFDFIVC GAGSSGSVIA ARLAQCGSAR VLLLEAGGDD
VAESVRDPAQ WPLNLGTSRD WGFVGEPAPE LYGRRLPLSM GKGLGGGSSI NVMVWARGHM
EDWNYFAAEA GDEAWGYESV LGYYRRIEDW RGTPDTVRRG AGGPVYVAQP RSPQPIAEAL
LNAASAIGIP VFDTPNGELM ESGGGASIAE LRIRDGKRES VFGSYVRPLM SRPNLTVLTD
ALVTRIIFDG IRATGVDVLV NGQRCAFTAR CETVLSLGAI NTPKVLMQSG IGPRDELKAH
GISVVQHLPG VGRNHQDHLA FGCTWAYRKP EGIGGGGCEA KLYWKSDSRL SQPDILQCQL
EFAVPSPVET GLETPAHGWT MFSGLAQPKS RGRLRLSGPN TNDPILIEPN SLSEPEDVAA
ALAAVELCRE LGNSDAFTPL VACEAVPGTR DRAGMIDFIR KSAVTYWHQS CTAKMGRDSM
SVVNNELKVY GVESLRIADA SIMPRITTGN TMAPCVVIGE RAGDLIRKTH GLADSSGVAP
FA
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