Gene Smed_0361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0361 
Symbol 
ID5321194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp384863 
End bp385834 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content60% 
IMG OID640789295 
Producthypothetical protein 
Protein accessionYP_001326053 
Protein GI150395586 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.662417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCAATT ACTTCAAACT CGGAATTCTG GCCGCCGTCG TCGGCGGCAC CTTGGGCCTT 
GGAACGCTGC AGGCTTCGTC GCAGGATCTG GAACTGACCA TCATGGCGCC CGCTGGCGCT
GGGGGCGGAT GGGATTCGGC TTCGCGCTCA ATGCAGGAAG CCATGATGGC GAGCGGCAAT
GCGAAAAGCG TGCAGGTTAT CAACGTCCCC GGCGCAGGTG GCACGGTTGG TCTTGCTCAG
TTCATCGGCT CCGCGAAGGG CAGCTCAAAT CAGCTTTTTG TCGCGGGCAT TACGCTCGTC
GGCGCAAGCA TCTCCAACCA GTCCCCGGTC GATCTGACGG AGGTCACTCC GATCGCTCGC
CTAACCGGCG ACCCGCTTGT GATCGTCGTC CCGAAGGATT CGCCGATCAA ATCAATGGAC
GATCTGCTGG CTACGATTAA GAAAGACGTC GCGACAACGA TCTGGGTTGG CGGATCGGCG
GGCGGTGCGG ATCATATCCT CGCAGCGCTC GTCACCAAGG CAGCAGGTGC TGACCCCAGC
AAGATCAACT ACGTCGCCTA TTCTGGCGGT GGTGAGTCGC TTGCCGCCAT GCTCGGTGGT
CAGGCGACCG CAGGCGTGTC GGGCTACGGC GAATGGGAAG GCCAGATCAA ATCCGGCGAC
CTCAGAGCAT TGGCGATTTC CTATCCGGAG CCGATCGAAG GCATCGAGGC AAAGCCTTTG
AAAGCACAGG GCCTCGATAT CGAACTCGTC AACTGGCGCG GTGTCTTCGC GGGTCCGGGC
GTCGAAGGCG CCGATCTCGA TGCGCTCAAG TCCGCCGTCG AGAAGACGGT GAAGTCCGCC
GAGTGGCAGG CAATCCTTAA AGCCCGCGGT TGGACCGACT ACTATGCGCC TTCCGACGAA
TTCAAGGCTT TCATCGGTTC GGAAACCGAA CGCGTGAAGA CCATCCTGAC GTCCATCGGT
CTCGCAAACT AA
 
Protein sequence
MRNYFKLGIL AAVVGGTLGL GTLQASSQDL ELTIMAPAGA GGGWDSASRS MQEAMMASGN 
AKSVQVINVP GAGGTVGLAQ FIGSAKGSSN QLFVAGITLV GASISNQSPV DLTEVTPIAR
LTGDPLVIVV PKDSPIKSMD DLLATIKKDV ATTIWVGGSA GGADHILAAL VTKAAGADPS
KINYVAYSGG GESLAAMLGG QATAGVSGYG EWEGQIKSGD LRALAISYPE PIEGIEAKPL
KAQGLDIELV NWRGVFAGPG VEGADLDALK SAVEKTVKSA EWQAILKARG WTDYYAPSDE
FKAFIGSETE RVKTILTSIG LAN