Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0348 |
Symbol | |
ID | 5321181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 375292 |
End bp | 375849 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789283 |
Product | MgtC/SapB transporter |
Protein accession | YP_001326041 |
Protein GI | 150395574 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.184436 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAAA TCTTCGCCGA CATCTTCGCA GATACGCATA CCCCCTATCC GATATTGTTC GCGCGTCTCT TCGGCGCCGT CCTGTTCGGG GCATTCATCG GCATCGAGCG CGAAAGGCGG CAGCGGCCAG CGGGCCTGAG GACCCATATT CTCGTCAGCC TCGCCTCGGC GATCTTCGCC GTGGTCGCCA TCGAAAGCGT TCACATGAAG AGCCTTTCGG GCCCGGAGGT GCGCATCGAT CCCATTCGCG TGGTAGAAGC CGTAACGGCG GGCGTGGCCT TTCTCGCCGC CGGCATGATC GTGTTCTCGA AGGGTGAAGT GAAAGGGTTG ACGACGGGCG CCGGCATGTG GCTCGCCGGA GCGGTCGGAC TTTCTGTCGG TTTCGGTTTC TGGTTGATCG CGGTCTTTGC CGCCGTGACG AGTCTCGTCG TACTCTTCGT CCTCGGCCGG TTGGAAGTCG CGCTGCAGTG GAAGGCGCCG GAAGATTTCA ACGCGACCGA TGGCGCTTCG CGAGCGGGTG ATGATGCCCT GCAGGAACAG GCTCGCACAC CTAAGTAG
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Protein sequence | MNEIFADIFA DTHTPYPILF ARLFGAVLFG AFIGIERERR QRPAGLRTHI LVSLASAIFA VVAIESVHMK SLSGPEVRID PIRVVEAVTA GVAFLAAGMI VFSKGEVKGL TTGAGMWLAG AVGLSVGFGF WLIAVFAAVT SLVVLFVLGR LEVALQWKAP EDFNATDGAS RAGDDALQEQ ARTPK
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