| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0314 |
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| Symbol | |
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| ID | 5321146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 338140 |
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| End bp | 339966 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640789249 |
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| Product | AsmA family protein |
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| Protein accession | YP_001326008 |
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| Protein GI | 150395541 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.39732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGGA AGATGCTCCA CATATTGCGC GATTCGGGCC TCAGATCTCG GCTTCGCCCG
CGCCACCTCG TCTGGTCGGC CGCCATAGGC GTCGCGCTCG CCGCCGCCTA CAATGCTGCG
TTGCCGCTCC TGGTTTCGAC GACCGAGGCG CGCGCGGCCA TGGAGCGGAT GCTTGACGAC
TGGTCGGGTG GAAAAAGCAC GATCAGCGGA GAACCTGAAG TCCGATTCTG GCCGGAACCT
CTGTTGACGC TCCCGATGGC GACGATCGTG ACCTCCGGGC CCGAACAGCG CCCGCTCGCG
GAGATCGGCC GTATCACCGC TTCCTTCAGC GTGCTCTCGG CACTTCGCGG CGAGCAGGCT
CTTGAGGAGG TCACGCTTGT CGAACCGGTC ATCACGCTCG AGCGCGGAGC GGACGGAACG
GTAAACTGGC AAAAGCCGCG CTGGCTCGTG CCCCCGGATA CCACCATACC GCAGGATGAG
GCACCCGTCG GCGACATCAC GATCGAGAAC GGCCGCGTCC GCATTATCGA CCGCATGGCC
GCCAATGGCG GGGGCATCGA CATTGCGGGG ATTTCCGGCA CGCTCAAATG GCCTTCCTTC
GGAGGGCGGC TGAGCACGCA ATTCTCCGCG ACGATCGGCG GCGAACAGAT CGGTTGGGCC
TTCGTGTGCG AAGAGCCGCT CGCCCTCTTC GCCGGACGCA ACGCCGCACT CAAGACATCG
CTGACTTCCG CTCCGCTGAC GTTTTCCTTC GAGGGTACCG GAAATCTCCC GCCGCAGCTT
TTCGCTTCCG GTCATCTGCA GATGTCCGCA CCCTCGCTGG CGAGGCTCGC CGCGTGGTAC
CGCAACGTGC CGGACGCCGG ATTGCCCGCA GGCGGATTCA GTATCGACAC AAAGGTGGAT
ACGAGTGAGA CGGCGTTGAA ACTGGAGGAC CTCCAGCTGG CCATTGGCGG CGCCGCGGCG
ACGGGTGTTC TGGATGTGCA ATTGGGATCC GGCAAAAGGC CGCGCGTGGA AGGGACGCTC
GCCTTCGACC GCATCGATCT CAACGGCCTG CCCCTGGCGG CGCTGAAGCC AGCACAGGAA
GACGACCGTG TATCGCAGAT GGTGCAAGCC GTCGTCGGGG GTTGGCGTCT GGATGTGCGG
CTGTCGTCGC AGGAGGTCCT GGCCGGGCCG TTGCATCTGA CCGATGTTGC CGCCGGGGTG
ATGATCGACG GCCGTCGGGT CTCGCTCGAT ATCGGAGACA GCACCTATGC GAACGGCAGG
CTGAGCGGCC GAGCCGTGCT GTCGGAGAAA GGGCTGGAAC AAGGCGGCAA GCTGCAGGCG
AGCCTCAAAA ACGCCGACTT CGCCGCCGTT CTCGACCGGT TCGGCCTGAA GGGGCCGCTT
CCGACAGGCC GCGGCGTACT CAGCATCGAT CTTGCGACCG GCCGGCCGCT CTGGGAGACG
GGAATCACCG ACGTCTTCGG TCGTCTCGAT TATTCCCTCA CCGATGGCAG CCTCGCCGGT
TTCGACGTTC GCGCCTTCAC CGATCTCGTG CGCAAGGGTG AATTCTTCTC GCTGTCGCAG
GCAAGCGACG GCACGCTCGA CTTCCGGACG GCAGACATCG AGGCGAGCTT CGGCGGCGGC
ACGGCGCGGC TGGACCGGGC CGCTTTCACC GGGCCTGCCG GCACTATTTC CGTGACCGGC
GTCGTCCCCT ATCGAAGCGG CAGTCTTGCC CTGGCGGGAA CACTCGCGAG CCCGGCAGAC
GACGACGAAC CACTGCAGTT CTTCATCGGC GGCTCCTGGC CGAATGCGGT GATCTCGCCG
CTTTCAGTCC TCCTTGGCCC GAACTGA
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| Protein sequence | MTRKMLHILR DSGLRSRLRP RHLVWSAAIG VALAAAYNAA LPLLVSTTEA RAAMERMLDD
WSGGKSTISG EPEVRFWPEP LLTLPMATIV TSGPEQRPLA EIGRITASFS VLSALRGEQA
LEEVTLVEPV ITLERGADGT VNWQKPRWLV PPDTTIPQDE APVGDITIEN GRVRIIDRMA
ANGGGIDIAG ISGTLKWPSF GGRLSTQFSA TIGGEQIGWA FVCEEPLALF AGRNAALKTS
LTSAPLTFSF EGTGNLPPQL FASGHLQMSA PSLARLAAWY RNVPDAGLPA GGFSIDTKVD
TSETALKLED LQLAIGGAAA TGVLDVQLGS GKRPRVEGTL AFDRIDLNGL PLAALKPAQE
DDRVSQMVQA VVGGWRLDVR LSSQEVLAGP LHLTDVAAGV MIDGRRVSLD IGDSTYANGR
LSGRAVLSEK GLEQGGKLQA SLKNADFAAV LDRFGLKGPL PTGRGVLSID LATGRPLWET
GITDVFGRLD YSLTDGSLAG FDVRAFTDLV RKGEFFSLSQ ASDGTLDFRT ADIEASFGGG
TARLDRAAFT GPAGTISVTG VVPYRSGSLA LAGTLASPAD DDEPLQFFIG GSWPNAVISP
LSVLLGPN
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