Gene Smed_0299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0299 
Symbol 
ID5321131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp319461 
End bp320156 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content64% 
IMG OID640789234 
Product6-phosphogluconolactonase 
Protein accessionYP_001325993 
Protein GI150395526 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 
TIGRFAM ID[TIGR01198] 6-phosphogluconolactonase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA ACATGCACAT ATTCGAAAAC GCGTCCGCAC TGGCGGAGGC CCTCGCGGAC 
GACGTCGGCG CAAGGCTTGC CGCTGCAATC GCGGCGAGAG GTACTGCGAG CCTCGCGGTG
TCGGGGGGCT CGACGCCAAA GGCGTTTTTC CAGTCGCTTT CCCGTCGCGA AATCGATTGG
CCGAAAGTGA CGGTCACCCT CGTCGATGAG CGCTTCGTGC CGCCGGAGAA CGAGCGCTCC
AATCATCGTC TGGTTGCCGA CAACCTGCTC AAGCACAGGG CTGCGGAGGC GCGTTTCGTT
CCGCTCTACT ACGCGGCAGA GACTGTGCCA GCGGCTGCGG CAATCGCGAG CCAGAAAACG
GCTGATCTCG GCGCACCTCT CGATGTCGTG GTGCTTGGAA TGGGAACGGA CGGCCACACG
GCCTCGTTCT TTCCCGGAGG ATCGCGCCTT GGTGAAGCAC TCGACCCGGC GACCCCGCGC
GGCGTGATCA CCATGGAAGC GGAAGGCGCC GGCGAACCCC GTCTCACCTT CACTTTCTCC
AGCTTGCAGG ATGCCGGCTA TCTGGTGCTG CATATCGAAG GCAGCAAGAA AGAGGTGCTT
GCTCAGGCAG AGGCCCCCGG CGCGGAGGCA GAGATGCCGA TCCGGGCCAT GCTCAGGCGG
GCCGCATCGC CGCTGCAGAT ATACTGGGCG CCTTGA
 
Protein sequence
MSANMHIFEN ASALAEALAD DVGARLAAAI AARGTASLAV SGGSTPKAFF QSLSRREIDW 
PKVTVTLVDE RFVPPENERS NHRLVADNLL KHRAAEARFV PLYYAAETVP AAAAIASQKT
ADLGAPLDVV VLGMGTDGHT ASFFPGGSRL GEALDPATPR GVITMEAEGA GEPRLTFTFS
SLQDAGYLVL HIEGSKKEVL AQAEAPGAEA EMPIRAMLRR AASPLQIYWA P