| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0295 |
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| Symbol | |
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| ID | 5321127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 314094 |
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| End bp | 315749 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640789230 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001325989 |
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| Protein GI | 150395522 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTGA GCGAAACGAC GAGCTCCCTT CTCGAGCCGG ACAGGGACTG GTGGCGCGGA
GCGGTAATCT ACCAGATCTA TCCCCGTTCC TTCCAGGACA CCAATGGCGA CGGGATCGGG
GATCTGCAGG GGATCACGGC TCGGTTGCCT CACATTGCCG GGCTCGGCGC GGACGCGATC
TGGATATCGC CCTTTTTCAC GTCCCCGATG AAGGATTTCG GCTACGATGT CTCGAATTAT
GTCGATGTCG ACCCGATCTT CGGCGCGCTC GACGACTTCG ATGCGCTGAT CGCCGAGGCG
CATCGGCTCG GTCTTCGAGT GATGATCGAC CTCGTCCTGT CGCACAGCTC GGACCAGCAT
CCCTGGTTCG TCGAAAGCCG GTCGACCCGC AGCAATGCAA AAGCGGATTG GTACGTCTGG
GCGGATTCGA AGCCAGACGG AACACCTCCG AACAACTGGC TGTCGATTTT CGGCGGTTCC
GCCTGGCAAT GGGATCCAAC GCGGCTGCAA TATTACCTGC ACAATTTCCT GATCTCGCAG
CCCGACCTCA ATCTGCATAA TTCCGAGGTT CAGGACGCAC TGCTCTCTGT CGCACGCTTC
TGGCTGGAGC GTGGCGTCGA CGGTTTTCGG CTCGACACGA TCAACTTCTA TTTCCATGAC
CGTGAGCTGC GCGACAACCC GGCTCTGGCA CCAGAACGCC GCAACGCCTC GACCGCGCCG
GCGGTTAATC CCTATAACTA CCAGGAGCAT ATCTACGACA AGAACCGGCC GGAGAACCTG
GAATTCCTGC AGCGCTTCCG TGCGTTGATG GATGAGTTCC CGGCGATTGC CGCCGTCGGG
GAAGTCGGCG ACAGCCAGCG TGGTCTCGAC ATCGCCGCCG AATACACCTC CGGTGGCGAC
AAGGTGCATA TGTGCTACGC CTTCGAGTTC CTGGCACCGG ATCAGCTGAC GCCGCAAAGG
GTGGCCGAGG TCCTGCGCGA CTTCCAGAGG GCGGCTCCCG AAGGCTGGGC CTGCTGGGCC
TTCTCGAACC ATGATGTCGT TCGCCATATC AGTCGCTGGG CACATGGAGT CACCAGCCGT
GATGCGCATG CGAAGCTGCT CGCCAGTCTG CTGATGTCGC TGCGTGGAAG CGTCTGCATC
TATCAGGGCG AGGAACTTGC GCTTGCCGAA GCGGAACTCG CCTATGAGGA CCTCAAGGAT
CCCTATGGCA TTCAGTTCTG GCCCGACTTC AAGGGCCGGG ACGGCTGCCG TACGCCGATG
GTCTGGGAGA GCCTCCCCGA TGGCGGCTTC AGCAGCACGA GGCCTTGGCT GCCGATTTGC
AAGAGTCACG TTCCGGGGGC AGTCGCCGTG CAGGAGAGCG ATCCGAACTC CGTGCTGCAT
CACTACCGCC GCTTTCTCGC CTTCAGAAAA GCGCACCGGG CATTCGCCAA GGGAGAGATC
GAGTTCGTCG AGACCAAGGG GGCTCTGCTT GGCTTCCTTC GCATTCATGG CGATGAGAAG
CTGTTCTGCC TGTTCAATAT GAGCGACCAG CCAGCGACGA AGGAATTACC GATCAAGCGG
CTTGAGCCGC TCGATGGTCA CGGCTTCGTC TTTGAGATAA TGGATCACGA GGTCAAGCTA
CCGGCCTGGG GCGCGTTTTT CGCGCGTCTG GCTTGA
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| Protein sequence | MTLSETTSSL LEPDRDWWRG AVIYQIYPRS FQDTNGDGIG DLQGITARLP HIAGLGADAI
WISPFFTSPM KDFGYDVSNY VDVDPIFGAL DDFDALIAEA HRLGLRVMID LVLSHSSDQH
PWFVESRSTR SNAKADWYVW ADSKPDGTPP NNWLSIFGGS AWQWDPTRLQ YYLHNFLISQ
PDLNLHNSEV QDALLSVARF WLERGVDGFR LDTINFYFHD RELRDNPALA PERRNASTAP
AVNPYNYQEH IYDKNRPENL EFLQRFRALM DEFPAIAAVG EVGDSQRGLD IAAEYTSGGD
KVHMCYAFEF LAPDQLTPQR VAEVLRDFQR AAPEGWACWA FSNHDVVRHI SRWAHGVTSR
DAHAKLLASL LMSLRGSVCI YQGEELALAE AELAYEDLKD PYGIQFWPDF KGRDGCRTPM
VWESLPDGGF SSTRPWLPIC KSHVPGAVAV QESDPNSVLH HYRRFLAFRK AHRAFAKGEI
EFVETKGALL GFLRIHGDEK LFCLFNMSDQ PATKELPIKR LEPLDGHGFV FEIMDHEVKL
PAWGAFFARL A
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