| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0291 |
|---|
| Symbol | |
|---|
| ID | 5321123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 309037 |
|---|
| End bp | 310140 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640789226 |
|---|
| Product | alanine racemase |
|---|
| Protein accession | YP_001325985 |
|---|
| Protein GI | 150395518 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.397925 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.910588 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA AAAAAGATTA CTCAAAGCGC TTTGGGAGGA TTTCGGGCAT GGCGGTCAAC
CTCAAGCAGT TAGCGGAGCT GCTCAGTCTG TCGCAGACCA CGGTCAGCCG GGCGCTTAAC
GGCTACCCCG AGGTCAATGC GGAGACGCGG GCGCGGGTGT TGGAAGCGGT CAGGGAGACG
GGCTACAGGC CCAATCGCGC AGCACAACGC CTCGCGACCG GGAAAGCCTT TTCGATCGGC
CTCGTCATGC CGATCGCGTC TGGCATCGAT TCCGACATCC ATTTTGGTGA GTTCCTGGCG
GGGCTGGCGG AGGAAGCCGT CGAGCATGAT TTTCACTTCG TGCTGAACCC CAGTGCTCCC
GAAGACGAGG AGGCGACGTT CCGCCGCCTG GCGGCGAGCG GCAATGTCGA CGCGGTCTTC
ATCGCCTATA TGCGCGCAAA CGATCCTCGC ATCGAGATGC TAAAGGCCCT CTCCATCCCC
TTCGTGGTTC ACGGCCGATC GATCGGTGGG CCGCGGGACT ATCCGTATCT CGATGTGGAC
AATACCGGCG CCTTCTACGA CGCTGCCAGG CTTCTCATGC AGTTGGGACA TCAACGTATC
GCTCTTATCA ACGGACCGGA GCACCTCACC TTTGCGATCC GCCGGAAAAA GGGCCTGATG
CGCGCACTCG CGGAGAAGGG TTTCAATCTC GACGAGGCGC TCGTCCACCA CTCGGCAATG
ACCGACGAAC ACGGCTACCG AAGCATGCAG CGTTTTCTCA AACGCCCGAA CCCGCCGACC
GCCGTTCTCT GCTCCAGCAC CGTGACGGCA CTTGGTGCGG TGCGTGCGAT CAACCAGGCC
GGCCTCGTCA TCGGCACCGA CATTTCGCTC ATCGCCCATG ACGATGTCCT GCCCATGCTG
AAGCCCGAGA ACTTCAGCGT CCCGCTGACG ACGACACGCT CCTCGCTTCG CGCGGCGGGT
GCGCGCATCG CAAAGCGGCT GATCGGCGGG ATCCTCGATC AGGGAGACTA TCCCGAGCAG
GAGCTTTGGC GCGCCGAATT GATCGTGCGA GCCTCGACCG GGCCCGCACC CGATCGCCAG
CGCAATTCAG GGAAAACTGT GTAG
|
|---|
| Protein sequence | MKNKKDYSKR FGRISGMAVN LKQLAELLSL SQTTVSRALN GYPEVNAETR ARVLEAVRET
GYRPNRAAQR LATGKAFSIG LVMPIASGID SDIHFGEFLA GLAEEAVEHD FHFVLNPSAP
EDEEATFRRL AASGNVDAVF IAYMRANDPR IEMLKALSIP FVVHGRSIGG PRDYPYLDVD
NTGAFYDAAR LLMQLGHQRI ALINGPEHLT FAIRRKKGLM RALAEKGFNL DEALVHHSAM
TDEHGYRSMQ RFLKRPNPPT AVLCSSTVTA LGAVRAINQA GLVIGTDISL IAHDDVLPML
KPENFSVPLT TTRSSLRAAG ARIAKRLIGG ILDQGDYPEQ ELWRAELIVR ASTGPAPDRQ
RNSGKTV
|
|---|
| |