| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0284 |
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| Symbol | fliR |
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| ID | 5321116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 303801 |
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| End bp | 304553 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640789219 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_001325978 |
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| Protein GI | 150395511 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.22977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCACCG ATCCCGAGGG TACGGTGCTG GCGCTGTTTG CGGCCTTCTG CCGGATCGGC
GGCTGCATCA TGATCATGCC CGGCTTCTCG ACCGCACGCG TCCCGATGCA GATCAGGCTG
TTCGTGGCAG TGGCGATCTC CATGGCCATC CTGCCGGTCA TGTGGACGGA CATCTATCCG
CAGGTGACGG GCAAAGGTCA CGATTATCTC TACCTGGTCG CGACCGAGAC CGCGGTCGGC
GCCGTGATAG GGCTCGTCGC GCGATATTAT GTGCTTGGCC TGCAGTTTGC CGGAACCGCG
ATGACGATGA TGATGGGGTT CAGCCCGCCG CCGACGGCGG ATGTGCTGGA GGATACCGCG
GAGAACCAGC TCACCAGCCT GATCAGTTTC GCCGGATTGA TGATTCTCTT CATGCTGGAT
TTCCATCACG TGATCTTCGA GGCCATCGCA CAGTCCTATA GAGTGATGCC TATAGGCGCG
GGTTTCGACC CGCAGGGAAT GCTGATCACG CTGACCAACT CGCTCGAACA GACCTTCATG
ATCATGCTCA GGCTCGCCAG CCCCTTGGTG ATTTACGGCC TTCTGTTCAA CGTCGCGATC
GGCATGGTGA ACAAGCTGGC GCCGCAGATC CCGGTCTACT TCATATCGCA GCCCTATCTT
ATCATGGGCG GCCTGTTCCT CCTCTATCTC GGCATCGCGG CGATGCTGCG CCTCTTTGCG
GACGGTTTCG CTCCCGTCAT GCAGGGTGGC TAG
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| Protein sequence | MITDPEGTVL ALFAAFCRIG GCIMIMPGFS TARVPMQIRL FVAVAISMAI LPVMWTDIYP
QVTGKGHDYL YLVATETAVG AVIGLVARYY VLGLQFAGTA MTMMMGFSPP PTADVLEDTA
ENQLTSLISF AGLMILFMLD FHHVIFEAIA QSYRVMPIGA GFDPQGMLIT LTNSLEQTFM
IMLRLASPLV IYGLLFNVAI GMVNKLAPQI PVYFISQPYL IMGGLFLLYL GIAAMLRLFA
DGFAPVMQGG
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