Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0281 |
Symbol | flgD |
ID | 5321113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 300886 |
End bp | 301302 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640789216 |
Product | flagellar basal body rod modification protein |
Protein accession | YP_001325975 |
Protein GI | 150395508 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0599272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTAA GCGGCGTCAA CAACACGTCC AACAGCTACA CGCCCATTGT TTCAGGCACG GAATCGGCCG GCGATGCGAG TGCGGCGACG CTCAACTACG AGAGCTTCCT CAAGCTGCTC GTGGCGCAGA TGAAGAACCA GGATCCCACC CAGCCGATGG ACGCAACGCA GCAGATCGCG CAGCTTGCGA CCTTCTCCCA GGTGGAGCAG ACGATCAAGA CCAACAAGAA CCTGGAGAGC CTGCTGCAGC GCACGTCGCT CAGCGAGGCG GATGCGGTGA TCGGCAGGAC TGTCACCAGC GCTGACGGCA AGACCACTGG TGTCGTCAAG GAGGTGAAAC TATACTCCGA CGGAATCATC GCAGTGCTCG ATACGGGCAA GGAGCTCGTC ATCGGTCCGG GCGTTAAAGT GAAGTGA
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Protein sequence | MAVSGVNNTS NSYTPIVSGT ESAGDASAAT LNYESFLKLL VAQMKNQDPT QPMDATQQIA QLATFSQVEQ TIKTNKNLES LLQRTSLSEA DAVIGRTVTS ADGKTTGVVK EVKLYSDGII AVLDTGKELV IGPGVKVK
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