Gene Smed_0281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0281 
SymbolflgD 
ID5321113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp300886 
End bp301302 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content60% 
IMG OID640789216 
Productflagellar basal body rod modification protein 
Protein accessionYP_001325975 
Protein GI150395508 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0599272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTAA GCGGCGTCAA CAACACGTCC AACAGCTACA CGCCCATTGT TTCAGGCACG 
GAATCGGCCG GCGATGCGAG TGCGGCGACG CTCAACTACG AGAGCTTCCT CAAGCTGCTC
GTGGCGCAGA TGAAGAACCA GGATCCCACC CAGCCGATGG ACGCAACGCA GCAGATCGCG
CAGCTTGCGA CCTTCTCCCA GGTGGAGCAG ACGATCAAGA CCAACAAGAA CCTGGAGAGC
CTGCTGCAGC GCACGTCGCT CAGCGAGGCG GATGCGGTGA TCGGCAGGAC TGTCACCAGC
GCTGACGGCA AGACCACTGG TGTCGTCAAG GAGGTGAAAC TATACTCCGA CGGAATCATC
GCAGTGCTCG ATACGGGCAA GGAGCTCGTC ATCGGTCCGG GCGTTAAAGT GAAGTGA
 
Protein sequence
MAVSGVNNTS NSYTPIVSGT ESAGDASAAT LNYESFLKLL VAQMKNQDPT QPMDATQQIA 
QLATFSQVEQ TIKTNKNLES LLQRTSLSEA DAVIGRTVTS ADGKTTGVVK EVKLYSDGII
AVLDTGKELV IGPGVKVK