Gene Smed_0277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0277 
SymbolflgK 
ID5321109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp297591 
End bp299009 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content63% 
IMG OID640789212 
Productflagellar hook-associated protein FlgK 
Protein accessionYP_001325971 
Protein GI150395504 
COG category[N] Cell motility 
COG ID[COG1256] Flagellar hook-associated protein 
TIGRFAM ID[TIGR02492] flagellar hook-associated protein FlgK 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTGT CTTCTGCAAT TGCCATCGCG CAATCCGCGT TCAGCACCAC GGCGCAACAA 
ACCGCCACGG TCTCGAAGAA CATTGCCAAT TCGGGCAATG CGGATTACTC GCGCCGCATG
GCCATGCTCG GGACCACCCC TGGCGGCGCC CAGATCGTAT CGATCTATCG GGCGCAGAAT
GAAGCGCTTC TCAAGCAGAA CCTGATCAGC ATTTCGCAGT CCTCCGCGCA GAGCAGTCTC
CTGTCCGGAC TGGAGATCAT GAAATCCGCC CTCGGCGGGA ATGATTACGA GTCGGCGCCA
TCCACCTATC TTTCGGCCTT CCGCAACAGT CTGCAGACCT TCGCGTCGAC GCCCGGCAAT
GCGACGATCG CGGCCACGGT CGTGTCGGAT GCCTCGGATC TTGCCAATTC CATCAGCAGA
ACCTCGGCCG CTGTTCAGGA CCTTCGTCTC GACACGGACA AGAAAATCGC TGAGGATGTC
GCCAATCTGA ACCGCCTTCT CGCGCAGTTC GAAACGGCGA ACAATGCCGT CAGACAGGCG
ACGGCAGCGG GGACGGACGC GACCGCAGCA CTCGACGACC GCGACAGGAT CCTCAAGCAG
GTATCGGAGC TCGTCGGCAT CTCGACCGTC ACACGGGCGA ACAACGACAC CGTCATCTAT
ACCGCAGGCG GCACCGTTCT GTTCGAGACT CTCCCGAGAG AGGTCACCTT TGCGCCGAAG
AGCGCTTACG ATGCCACCGT CACCGGCAAC GGCATATTCA TCGACGGGGT GCCGCTCGCG
GCCGGCAACG GCGCCGACAC CAATGCTCAA GGGAAGCTCG CCGGTCTGCT TCAGCTGCGC
GACGATATCG CTCCGACCTT CCAAACGCAG CTCGACGAGA TGGCCAGGGG CCTGGTCAGC
CTGTTCCAGG AAGGCGGCCT GCCCGGGCTC TTCACGTGGT CCGGCGGCAA CGTGCCCGCT
GCGGGCGCCG TGGAAGCAGG GATCGCCGCG TACCTTTCGG TCAATCCTGC GGCGAAATCC
AATCCCTTCC TCCTGCGCGA TGGCGGTTTC AACGGCATCG TTTCGAACCC GGGCAACAAT
GCCGGCTTTA CGGACCTGCT CGACAGCTTC GTCGCAGCCA TGGACGGCGA CATGGCATTC
GACTCTGCGG CCGGGCTCGA TGGCACGAGC TCGATCATGG AGTTCGCGGC TTCGTCCGTC
GGCTGGTTCG AGCAGATACG CAGCGGCGCC TCCACCGCCG ACGACAACAA GGCGGCGCTC
CTGGCGCGAA CGCAGGAGGC ACTCGGCAGC GTGACCGGCG TGAGCATCGA CGAGGAACTT
TCGCTGCTTC TCGATCTGGA GCAGTCCTAC AAGGCCTCGG CCAAGTTGAT CAGCACAGTC
GACGCCATGA TGGCGTCGCT TCTGGAAGCC GTGAGGTAA
 
Protein sequence
MSLSSAIAIA QSAFSTTAQQ TATVSKNIAN SGNADYSRRM AMLGTTPGGA QIVSIYRAQN 
EALLKQNLIS ISQSSAQSSL LSGLEIMKSA LGGNDYESAP STYLSAFRNS LQTFASTPGN
ATIAATVVSD ASDLANSISR TSAAVQDLRL DTDKKIAEDV ANLNRLLAQF ETANNAVRQA
TAAGTDATAA LDDRDRILKQ VSELVGISTV TRANNDTVIY TAGGTVLFET LPREVTFAPK
SAYDATVTGN GIFIDGVPLA AGNGADTNAQ GKLAGLLQLR DDIAPTFQTQ LDEMARGLVS
LFQEGGLPGL FTWSGGNVPA AGAVEAGIAA YLSVNPAAKS NPFLLRDGGF NGIVSNPGNN
AGFTDLLDSF VAAMDGDMAF DSAAGLDGTS SIMEFAASSV GWFEQIRSGA STADDNKAAL
LARTQEALGS VTGVSIDEEL SLLLDLEQSY KASAKLISTV DAMMASLLEA VR