Gene Smed_0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0276 
SymbolflgE 
ID5321108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp296360 
End bp297568 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content61% 
IMG OID640789211 
Productflagellar hook protein FlgE 
Protein accessionYP_001325970 
Protein GI150395503 
COG category[N] Cell motility 
COG ID[COG1749] Flagellar hook protein FlgE 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTCT ACGGTACCAT GAGAACGGGC GTGTCCGGCA TGAACGCCCA GTCGAACCGG 
CTCAGCACAG TCGCCGAGAA CATCGCCAAC GCCAATACCA CCGGCTACAA GCGGGCGTCG
ACGGAATTCT CATCGATGAT CCTGCCGTCG GGCAACGGCG CTTACAATTC CGGCGGCGTA
CAGACGGAGG TGCGCTACAG TATTTCCCAG CAGGGCGCGA CGACCTTCAC CACCTCGGCG
AGCGACCTCG CCATCGACGG CGGCGGCTTC TTCATCGTCG AAGGCGCAAA CGGCCAGGAA
TATCTGACCC GCGCCGGCTC CTTCGTTCCG GACAGTGAGG GCAATCTGGT CAACGCCGCC
GGCTTCACGC TGATGGGCTA CGAATACGAG GCTGGCGTCG ATCCGACCGT GGTCGTCAAC
GGTTTCGACG GGCTGACGAG GGTCAATCTC GCTTCCAAAG GCCTCATCGC AGCGGGGTCG
ACCACCGGCT CCATGGGCGC GAACCTGCCT TCGGGCGCAG CTGTCGGCGA CATTTCTACA
ACTTCGCTCG TCGTCTATGA CAGCCAGGGC AATACCCGCA TCCTGGACTT CAACTACGAA
AAGACCGCTG CGAACGCCTG GTCGGTCGAA GTCGTCGACC GGACCTCGTC GACGGTTCTC
GGTACGCAAA CGTTGAATTT CAACGCGGAT GGTTCCCTCA CAGCGACGCC AGCCACCTTG
ACGACGTCCG CGATGGCAAG CCTTCCCGGT ACGGGTGCAA ACCTTTCGGC GCTGACCATC
GACCTGACGA AGACGACCCA GCTTGGCTAC GCCTTCAACG CCGACGGCGG CTCGATCGAC
GGCAATGCGC CAAGCAAGGT TGCCGGCTAC CAGATCGACT CCGACGGTAT CGTCTATGTC
AAATACGAGA ACGGCAAACT CGATCCGCGC TATCGCATCG CTCTCGCCAA CGTCCAGAGC
CCGGACAAGC TGAAGCCTGA ATCGGGCAAC GTCTATTCGC AGGGCGTCGA TTCCGGTGTC
ATCATCACCG GTTTCGCCGG ATCGGGCGAT TTTGGTGAAA TCCTCTCCGG CGCTCTCGAA
AGCTCCAATG TCGACATTGC CGAGGAACTG ACGGCGATGA TCGAGTCGCA GCGCAACTAC
ACGGCAAACT CCAAGGTCTT CCAGACCGGC TCGGAGCTGC TCGAAGTGCT CGTGAATCTG
AAGCGCTAA
 
Protein sequence
MSLYGTMRTG VSGMNAQSNR LSTVAENIAN ANTTGYKRAS TEFSSMILPS GNGAYNSGGV 
QTEVRYSISQ QGATTFTTSA SDLAIDGGGF FIVEGANGQE YLTRAGSFVP DSEGNLVNAA
GFTLMGYEYE AGVDPTVVVN GFDGLTRVNL ASKGLIAAGS TTGSMGANLP SGAAVGDIST
TSLVVYDSQG NTRILDFNYE KTAANAWSVE VVDRTSSTVL GTQTLNFNAD GSLTATPATL
TTSAMASLPG TGANLSALTI DLTKTTQLGY AFNADGGSID GNAPSKVAGY QIDSDGIVYV
KYENGKLDPR YRIALANVQS PDKLKPESGN VYSQGVDSGV IITGFAGSGD FGEILSGALE
SSNVDIAEEL TAMIESQRNY TANSKVFQTG SELLEVLVNL KR