Gene Smed_0271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0271 
SymbolmotB 
ID5321103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp290915 
End bp292108 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content63% 
IMG OID640789206 
Productflagellar motor protein MotB 
Protein accessionYP_001325965 
Protein GI150395498 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0757415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG AAAGCCATCA CAACGGCAAG AATGAAATCA TCATCGTCCG GCGTTCCGCA 
GGTAGCCACG AAGGCCATCA CGGCGGCGGA TGGAAGATCG CATATGCCGA TTTCATGACG
GCAATGATGG CCTTCTTCCT GGTTATGTGG CTGATCAACG CCGCGAATGA GGAGACCAAG
GCGGCGATCG CCGCCTATTT CAATCCGGTG CAGCTGACCG ATCAAAAGCC GGCGGAAAAA
GGGTTGAAGG ATCCGGCCAA GGATGCGCAG GGCGAAAAGA CGCAGCAACG CTCCAAGGTC
GACGGCGACC AGACGAAGTC GGGCGGCTCG GCAAAGTCCG GCGATCAGCT GACGGCGACT
TCGGGCGAAG AGACCAAATA TTCTGACGCC GACTTCTTCG AAAATCCCTA TTCGGTCCTG
TCGGAGATCG CCCGCGAAGT AGGCCACGAA GCGAATATCA GCGTCAAGGG CGACGGCGGT
GCCGCCGAGT CGGGTCCTTC GACGGGCGCC GCCGGGGGCG AAGCCTATCG TGACCCCTTC
GACCCGGACT TCTGGACCAA GCAGGTGGAA GTGAAGGACG CCGGCAACAC GGTCGAGAGC
GACGTGGCGA TTGCGGCGAA TGCGGCCGCC GAAGAGAAGT TCGTGCCCGA AGAAACATCC
GCAAAAGCTT TACAGAACCA GGCGAATGCT GAGGACCGCA CCGAGAACGA AGCGGCGGCC
GAAGACCGGC AGCAGGAGGC GGAAGCCTTG AAAGCCGAGA TCGAAAGGGA GCTCGGCGGC
GAGGCCGGGC GGCTTCTCGA AGGCCTGGTG GTGGCGCCGG CCGAGGGCGG CCTGCTGGTG
ACGATCAGCG AGCAGACGGA CGCGCCGATG TTCGCAGTCG GATCCGCCGT TCCGCAAAAG
GAGCTGGTGC TTGCGATGGA GAAAATCGGC AGGCTGCTCG CGCAGCGCCC TGGCGCCGTA
GCCGTCCGCG GCCATACCGA CGGACGGCCG TTCAAGGACG GAACCTATGA CAATTGGCGC
CTTTCCGCAG CACGCGCCCA GAGTGCCTAT TACATGCTGG TCCGCGGCGG CTTGAAGGAA
GAGCGCGTGA AACAGATCAG CGGCTTTGCC GACCGGCGGC TCCAGGTGCC GAACGATCCT
TACGCGCCCG CCAACCGCAG GATTGAAATC CTGCTGCAAT CGGGCCAGGG CTGA
 
Protein sequence
MSDESHHNGK NEIIIVRRSA GSHEGHHGGG WKIAYADFMT AMMAFFLVMW LINAANEETK 
AAIAAYFNPV QLTDQKPAEK GLKDPAKDAQ GEKTQQRSKV DGDQTKSGGS AKSGDQLTAT
SGEETKYSDA DFFENPYSVL SEIAREVGHE ANISVKGDGG AAESGPSTGA AGGEAYRDPF
DPDFWTKQVE VKDAGNTVES DVAIAANAAA EEKFVPEETS AKALQNQANA EDRTENEAAA
EDRQQEAEAL KAEIERELGG EAGRLLEGLV VAPAEGGLLV TISEQTDAPM FAVGSAVPQK
ELVLAMEKIG RLLAQRPGAV AVRGHTDGRP FKDGTYDNWR LSAARAQSAY YMLVRGGLKE
ERVKQISGFA DRRLQVPNDP YAPANRRIEI LLQSGQG