Gene Smed_0268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0268 
Symbol 
ID5321100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp288963 
End bp289928 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content62% 
IMG OID640789203 
Productflagellin domain-containing protein 
Protein accessionYP_001325962 
Protein GI150395495 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA TCATGACCAA CCCCGCCGCC ATGGCGGCGT TGCAGACGTT GCGCGCGATC 
AATCACAATC TGGAGACCAC GCAGGGCCGC ATCTCGTCCG GTTATCGGGT GGAGACGGCG
GCCGACAACG CCGCCTACTG GTCGATCGCA ACGACGATGC GATCGGACAA TGCCGCGCTG
TCGACGGTCC ACGACGCCTT GGGCCTCGGC GCTGCCAAAG TCGACACGTT CTACTCGGCC
ATGGATACGG TCATCGACGT GATGACGGAG ATCAAGGCGA AGCTCGTCGC GGCAAGTGAG
CCGGGCGTGG ACAAGGACAA GATCAACAAG GAAGTTGCCG AACTCAAGAG CCAGCTGAAG
TCGGCCGCGC AATCTGCCTC CTTTTCCGGC GAAAACTGGC TTTATAACGG CGCCGCGGCA
GCACTTGGCA CCAAATCGAT CGTTGCCTCC TTCAACCGTA GCGCCGACGG CAGCGTTGCG
GTCTCGACGC TCAATTATGA CACCGCCAAA TCCGTCCTGA TCGACGTTGC CGACCCCGCG
CGCGGCATGC TCACCAAGGC CGTCGATGCG GATGCCCTCC AGTCAACTCC GGCGGGCACG
GCGCGCAATT ATTATCTCAT CGATGCCGGC GCCGCCCCGG CAGGCGCGAC CGAGATAGAG
ATCGACAGCG CAACGACCGG TGCTCAGCTC GGCGACATGA TCAGCGTCGT CGACGAGCTC
ATCAGCCAGC TGACCGACTC CGCCGCCACG CTGGGGGCGA TCACCAGCCG CATCGAAATG
CAGGAAAGCT TCGTCGCCAA TCTTATGGAC GTGATCGACA AGGGCGTAGG CCGCCTCGTC
GATGCCGACA TGAACGAGGA ATCGACGCGG CTGAAGGCTC TGCAGACGCA GCAGCAGCTC
GGCATTCAAT CGCTGTCGAT CGCAAACACC ACCTCGGAAA ACATTCTCCG CCTGTTCCAG
GAGTAA
 
Protein sequence
MTSIMTNPAA MAALQTLRAI NHNLETTQGR ISSGYRVETA ADNAAYWSIA TTMRSDNAAL 
STVHDALGLG AAKVDTFYSA MDTVIDVMTE IKAKLVAASE PGVDKDKINK EVAELKSQLK
SAAQSASFSG ENWLYNGAAA ALGTKSIVAS FNRSADGSVA VSTLNYDTAK SVLIDVADPA
RGMLTKAVDA DALQSTPAGT ARNYYLIDAG AAPAGATEIE IDSATTGAQL GDMISVVDEL
ISQLTDSAAT LGAITSRIEM QESFVANLMD VIDKGVGRLV DADMNEESTR LKALQTQQQL
GIQSLSIANT TSENILRLFQ E