Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0261 |
Symbol | |
ID | 5321093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 281729 |
End bp | 282268 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640789196 |
Product | hypothetical protein |
Protein accession | YP_001325955 |
Protein GI | 150395488 |
COG category | [S] Function unknown |
COG ID | [COG3334] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.74612 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGAC ACTTCGAAGA TTTTATCGCC AGGGCGCGCC GCGCGCTCCT GGGCTCGGTC GCCGGCGCAT TCCTGCTTTC GATTTCAGGT GCTTTCGCAC AGGACGTCAC GGCGCCGCCG GCCGACAGCG CGGCGGCCAG CGAAATCGAG AAGTTCTGCA CCAACATCGC GGATGCCGCG CGCGACCAGC GCTATGTTCT GCAGCGCAAG GACCTGGAGA AATTGAAGGC GAATGTCGAC GAGCGGATCG CGACGCTGGA GACCCGCCGG GCGGAATACG AAGACTGGCT CAAGCGCCGC AACGATTTTC TCAAGCAGGC GGAGCTCGGT CTCGTCGACA TCTATAAGTC GATGAAGCCG GATGCCGCCG CGGGCAAGTT GGAGATGGTG CGCCCGGAAA TCGCGGCTGC GATCGTCATG CGCCTGCCGC CGCGCCAGTC GTCGCTGATC CTGAGCGAGA TGAGCGACGA GAAGGCGGCG ATGCTCACCA ATATCATTTC GAGCGCGAGC GATCCCGATA CCTCCAAGGA GCCATCATGA
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Protein sequence | MTGHFEDFIA RARRALLGSV AGAFLLSISG AFAQDVTAPP ADSAAASEIE KFCTNIADAA RDQRYVLQRK DLEKLKANVD ERIATLETRR AEYEDWLKRR NDFLKQAELG LVDIYKSMKP DAAAGKLEMV RPEIAAAIVM RLPPRQSSLI LSEMSDEKAA MLTNIISSAS DPDTSKEPS
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