Gene Smed_0261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0261 
Symbol 
ID5321093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp281729 
End bp282268 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content63% 
IMG OID640789196 
Producthypothetical protein 
Protein accessionYP_001325955 
Protein GI150395488 
COG category[S] Function unknown 
COG ID[COG3334] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.74612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGAC ACTTCGAAGA TTTTATCGCC AGGGCGCGCC GCGCGCTCCT GGGCTCGGTC 
GCCGGCGCAT TCCTGCTTTC GATTTCAGGT GCTTTCGCAC AGGACGTCAC GGCGCCGCCG
GCCGACAGCG CGGCGGCCAG CGAAATCGAG AAGTTCTGCA CCAACATCGC GGATGCCGCG
CGCGACCAGC GCTATGTTCT GCAGCGCAAG GACCTGGAGA AATTGAAGGC GAATGTCGAC
GAGCGGATCG CGACGCTGGA GACCCGCCGG GCGGAATACG AAGACTGGCT CAAGCGCCGC
AACGATTTTC TCAAGCAGGC GGAGCTCGGT CTCGTCGACA TCTATAAGTC GATGAAGCCG
GATGCCGCCG CGGGCAAGTT GGAGATGGTG CGCCCGGAAA TCGCGGCTGC GATCGTCATG
CGCCTGCCGC CGCGCCAGTC GTCGCTGATC CTGAGCGAGA TGAGCGACGA GAAGGCGGCG
ATGCTCACCA ATATCATTTC GAGCGCGAGC GATCCCGATA CCTCCAAGGA GCCATCATGA
 
Protein sequence
MTGHFEDFIA RARRALLGSV AGAFLLSISG AFAQDVTAPP ADSAAASEIE KFCTNIADAA 
RDQRYVLQRK DLEKLKANVD ERIATLETRR AEYEDWLKRR NDFLKQAELG LVDIYKSMKP
DAAAGKLEMV RPEIAAAIVM RLPPRQSSLI LSEMSDEKAA MLTNIISSAS DPDTSKEPS