Gene Smed_0257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0257 
SymbolfliE 
ID5321089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp278957 
End bp279292 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content63% 
IMG OID640789192 
Productflagellar hook-basal body protein FliE 
Protein accessionYP_001325951 
Protein GI150395484 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATG CAATTCAGTC CATAGGTGCG TTTTCGGCCG TCAAGGAGAC CGAAGCCGCC 
GGTTCGAGCT CGTCCGCCTC GCTCGCAACG CCGGGTACAG GCGCGGCCGC TCCTCAGGCG
GGCAGCTTCG CGGAAGTCCT CGGAAACATG ACCACGGATG CCATTCGCTC GGTGAAATCG
GCCGAGGGCG TCTCGCTCCA GGCGATCCGC GGGGAAGCGA ATACGCGTGA GGTCGTCGAC
GCCGTGATGA GCGCCGAGCA GTCTCTCCAG ACGGCGATCG CGATACGCGA CAAAGTGGTC
ACCGCCTATC TCGAAATCGC GCGCATGCAG ATCTGA
 
Protein sequence
MIDAIQSIGA FSAVKETEAA GSSSSASLAT PGTGAAAPQA GSFAEVLGNM TTDAIRSVKS 
AEGVSLQAIR GEANTREVVD AVMSAEQSLQ TAIAIRDKVV TAYLEIARMQ I