Gene Smed_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0236 
Symbol 
ID5321068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp260887 
End bp261363 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content62% 
IMG OID640789171 
Productputative CheW protein 
Protein accessionYP_001325930 
Protein GI150395463 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.270011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCCA TGACCAATGC CGCTAAACAC CTGACAAATG GCGGACGGGA GCTGATCGCT 
TTCCGCGTCG GCGACCAGGA ATTCTGCGTG AACATCATGT CGGTGCGCGA AATTCGCGGA
TGGACGCCGG CCACTCCGAT GCCGCATGCG CCGTCCTATA TGCTCGGCGT CATCAATCTG
CGCGGCGCGG TGCTGCCGAT CATCGATTTC TCCGCGCGTC TCGGGATGCC GCCGGCCCAG
CCGACGGTTC GGCACGTGAT CATCGTGGCG CAGGTCAACC GCCAGGTGGT CGGCCTGCTG
GTCGATGCCG TTTCCGACAT ACTGACCGTT TCCGACAGCG ATATTCAGCC GACGCCGGAT
ATCGCGTCCG AGTTTGATCG GAGCTTCGCG CGTGGTGTCT TGGCGATCGA GGGCCGGATG
ATCTGCCTCG TTGAACTCGA CTCGGTTTTC CAGGGCGAGG AAAGGGAGGC TGCATGA
 
Protein sequence
MMPMTNAAKH LTNGGRELIA FRVGDQEFCV NIMSVREIRG WTPATPMPHA PSYMLGVINL 
RGAVLPIIDF SARLGMPPAQ PTVRHVIIVA QVNRQVVGLL VDAVSDILTV SDSDIQPTPD
IASEFDRSFA RGVLAIEGRM ICLVELDSVF QGEEREAA