| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0227 |
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| Symbol | |
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| ID | 5321059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 251880 |
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| End bp | 252860 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789162 |
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| Product | monosaccharide-transporting ATPase |
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| Protein accession | YP_001325921 |
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| Protein GI | 150395454 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.154077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0935895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCCA AGCTCCTCAA GAACCGTGAA ATCCTGCTCG TCGTTGCGAT TGCGGTGCTG
CTCGCTATCA TCGCCTTGCG CTTCCCGGCT TTCGTGGCGC CGTCCAATCT CGCGCGCGTC
TATAACGACA CCTCGATCCT CGTCATCCTG GCGCTTGGAC AGATGGCGGT TATTCTTACC
CGCTGCATCG ACCTGTCGAT GGCGGCCAAC CTCGCGCTCT GCGGCATGGT GGCAGCCATG
CTGAACAATT TCTTCCCCGG CCTGCCGATC CCACTCATCA TTTTTGCCGC CATGGCGCTG
GGCGGGTTCC TCGGCGCGAT CAACGGTACG CTGGTCTGGA AGCTCAACAT TCCGCCGATC
GTCGTGACCC TAGGGACTTT GACGATCTAC CGCGGTCTCA TCTTCGTTTT GACGAACGGC
AAATGGATCA ATGCGCATGA GATGAGCGAC CCCTTCAAGG CGCTGCCGCG GCTGGTCGTC
GCCGGCATGC CGGTGCTTTC CTGGCTCTCC TTCCTCATGA TAGCGCTGAT GTTCCTGGTC
ATCGGACGTA CGCCGCTCGG CCGCGCCTTC TATGCCGTCG GGGGCAATCC GCATGCGGCC
GTCTACACCG GCATCGATGT CGGCCGGACG CGCTTCTTCG CCTATTGTCT CTCGGGTACG
CTTGCGGGCC TGTCAGGTTA TCTCTGGGTA TCGCGTTATG CCGTCGCCTA TGTGGACATC
GCCGCCGGAT TCGAGCTCGA CATCATCGCG GCCTGCGTCA TCGGCGGCAT TTCGATTGCC
GGCGGCATCG GCTCCGTGGC TGGTGCGGTG CTCGGAGCAC TCTTCCTCGG CGTGATCAAG
AACGCGCTGC CGGTCATCGA TATCTCGCCC TTCGCGCAGT TGGCGATATC CGGAACGGTC
ATCATCATCG CGGTTGCCGT CAATGCCCGC GCCGAGCGGC GCAAGGGCAG GGTCATTCTC
AAGAAAGCGG AGGCGGTCTG A
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| Protein sequence | MMAKLLKNRE ILLVVAIAVL LAIIALRFPA FVAPSNLARV YNDTSILVIL ALGQMAVILT
RCIDLSMAAN LALCGMVAAM LNNFFPGLPI PLIIFAAMAL GGFLGAINGT LVWKLNIPPI
VVTLGTLTIY RGLIFVLTNG KWINAHEMSD PFKALPRLVV AGMPVLSWLS FLMIALMFLV
IGRTPLGRAF YAVGGNPHAA VYTGIDVGRT RFFAYCLSGT LAGLSGYLWV SRYAVAYVDI
AAGFELDIIA ACVIGGISIA GGIGSVAGAV LGALFLGVIK NALPVIDISP FAQLAISGTV
IIIAVAVNAR AERRKGRVIL KKAEAV
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