| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0224 |
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| Symbol | |
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| ID | 5321056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 248159 |
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| End bp | 248971 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640789159 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001325918 |
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| Protein GI | 150395451 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0877662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.197507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGAGA AAGAAAGACA TAGGATCATC CTGTCGGCCG TACAGGAAAA ACCGGTCGCG
ACCGTGCCTG AACTCGTCGA TCTCACCGGC AGCTCGGAGG CGACGATCCG CCGGGACATT
GCGGCGCTGC ATGTGCAGAA GCGCCTGCGA CGCGTCAGGG GCGGCGCCGA GGCGATCAAC
CCGCCGCAGT TCGTCGGCCT TGCCGGCCGG CCCTTCAGAG TGAACGAAGG TTTGCATGCG
CGGGAGAAAC AGGCGATTGC CCGGGAAGCG GTGGCGCTTT GTCAGGACGG CGAACCGATC
ATCATCAATG GCGGCACGAC GACATTTCAA ATGGTTCATT TCCTCGCCAA TCGCCGGATG
CAGGTCTTCA CCAATTCATT TCCGATCGCC GAACACCTGC TCAAGCATTC CAAGAACACC
GTCATGTTGT CGGGCGGGAC GATCTATCGC GAGCAGAACA TCATATTGAG CCCTTTCGAA
AATGACGTGA CGCGCAACTT CTATGCGCGG CGCATGTTCA TGGGGGCGCA GGGGCTCGGG
CCTCTCGGGC TGATGGAAGC AGATCCCCTG CTGATCCAGG CCGAGCAGAA GCTTATCGAC
CAGGCCGACG ATCTCGTCGT GCTCGTCGAC TCCTCGAAGT TTCACAGGCG CTCGAGTCTC
ATTCTGTGTG GCCTCAAGCG CATCGCCACC GTCATCACGG ACGCGGGCAT CGAGGACCGT
CATGCCTCGA TGCTTGAAAA TGCCGGCGTC AGCCTGATCG TCGCCGCTCA GAGCGCTAGG
GCCGATGCCG AAAAGGCTTC GACATCCGCA TGA
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| Protein sequence | MHEKERHRII LSAVQEKPVA TVPELVDLTG SSEATIRRDI AALHVQKRLR RVRGGAEAIN
PPQFVGLAGR PFRVNEGLHA REKQAIAREA VALCQDGEPI IINGGTTTFQ MVHFLANRRM
QVFTNSFPIA EHLLKHSKNT VMLSGGTIYR EQNIILSPFE NDVTRNFYAR RMFMGAQGLG
PLGLMEADPL LIQAEQKLID QADDLVVLVD SSKFHRRSSL ILCGLKRIAT VITDAGIEDR
HASMLENAGV SLIVAAQSAR ADAEKASTSA
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