Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0194 |
Symbol | |
ID | 5321024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 213236 |
End bp | 214828 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640789127 |
Product | sulfatase |
Protein accession | YP_001325888 |
Protein GI | 150395421 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGCTCA TTCCCTTCCA ACTGCATGAC TACCCCTTAG CCTTGACCCT TGGCTGCTAT CTGCTGGCCT GCGCGGTGAT CTTCCATACG GACCGTTTCG CTCTGCCGGC GCGCGAACGC CGGAAGAACG CACCTCGATA TGGTCGCCAT CACGACAGGA TAGACCGCCT CGCCCGGCTG CCGGTCATCG CACTCGTTTT CGCCGGCTTT TTCGCTATTT CGTGGAGGCC GCTCTATGCC GCTGCCGGAA CGATGAGTTT CTTCATCATC TTCACCGGCA TTTCCCGCGC CAAGTACAAG TTCATCCGCG AGCCATTGGT CTTTTCCGAC ATCGCCCTGG TCGCGGACGT ATTCAAATAC AAGTCCATCT TCTATGCGAC CTCACTGAAC GTCGTCTTCT GGATCGTCGC CTTCCTGTAC GTGTTTGGCG TGTCGGGGCT CTATATGTAT TTCGAGCCTG CTATCCTGCC CGAGAGAAAC CGGCTCTTCT GGGTTCTCGT CTTGATCGGA ATTGCCGCCG GGCCCTGGGC CCTGCTGTTC TACGGACCGG TCAACCGCCC GACAGCCGCT CTCGTGCAGA GGCTTGTGAA GGCGATCAAC GTCAAGATCA ACACGGTGCG TTTCGGCACC TTCGCTTCCG TCGTCTTCCA CTTCATCATC TGGCTCGGCG TCAAGCGCGA CAAGATCGTC GCCGAATTGT CGGGAATGCT GCGCGCCGCA GTACACGACC TCATCGGTCA CGAGGAAGCC CCGCTCATCG TAGTATGGCA ATCGGAGTCC TTCATCGACA TGCGGCACTT CGGCGTCGAT TCCATCAAGC TTCCGACGAT CGACCGGCTG CGCAAGCAGG CGGTGCAATG GGGCCGATTG AGCAATGTCT TCGAAGGCGG ATATACGCTG CGGACCGAGT TTGCGGTCCT CAGCGGCCTC GTTCCCGACG ATATTCACGT CGACGCAAGC TATCCCTATC TCCGCGCCGC GCACTATGCC GACGTCGTCT GGCCGGGAAA GCTGAAGCGT GCCGGTTGGC GCACGCATTT CATCCACCCC TACGACCGGA CATTCTTCCT GAGGCATAAG GCAATGCCCC TTCTCGGATT CGAGAAGCTG ACCATGCTCG ATGCCTTCGA CCACAATCCG GAGCGTGACG GACTCTATGT CTCCGACGCG ACGCTGGCGG CGCGCGTGCT GAGCGAGGTC CAGAAGCTGC CGGAAGAGGA AAGCGGTTTC TTCTTCGTCG CATCAATGGC CAACCACGGC CCCTGGGAGC CAGGACGTGT CGGAACGCTC ACCAACCCGG TCGACATCTA TCTGGCAATT CTCGAGCAGT CGGACGCCGC GCTGAAGCAG TTGGTCGACG GCCTCAACAA GCTCGACCGG CCGGTCTGGC TCGTCTTCTA TGGCGACCAT GCGCCCCTTC TGAAGTCTTT CGCGGACCCC TTCCCGGATC CCCGCTCGGA TTATTTCATC GTGCCGCTCG CCAAGGCGCG CGCTTCGGCC CATAGCTCGA AGCAAGCGAA AGACGAGGAT CCCTGGAACC TGCTCGGGTC CATGCTGAAG CACGCCAATC TGCACAAGGA CGCGCTGCAA TAG
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Protein sequence | MALIPFQLHD YPLALTLGCY LLACAVIFHT DRFALPARER RKNAPRYGRH HDRIDRLARL PVIALVFAGF FAISWRPLYA AAGTMSFFII FTGISRAKYK FIREPLVFSD IALVADVFKY KSIFYATSLN VVFWIVAFLY VFGVSGLYMY FEPAILPERN RLFWVLVLIG IAAGPWALLF YGPVNRPTAA LVQRLVKAIN VKINTVRFGT FASVVFHFII WLGVKRDKIV AELSGMLRAA VHDLIGHEEA PLIVVWQSES FIDMRHFGVD SIKLPTIDRL RKQAVQWGRL SNVFEGGYTL RTEFAVLSGL VPDDIHVDAS YPYLRAAHYA DVVWPGKLKR AGWRTHFIHP YDRTFFLRHK AMPLLGFEKL TMLDAFDHNP ERDGLYVSDA TLAARVLSEV QKLPEEESGF FFVASMANHG PWEPGRVGTL TNPVDIYLAI LEQSDAALKQ LVDGLNKLDR PVWLVFYGDH APLLKSFADP FPDPRSDYFI VPLAKARASA HSSKQAKDED PWNLLGSMLK HANLHKDALQ
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