| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0193 |
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| Symbol | |
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| ID | 5321023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 211898 |
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| End bp | 213220 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640789126 |
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| Product | capsule polysaccharide biosynthesis protein |
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| Protein accession | YP_001325887 |
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| Protein GI | 150395420 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3562] Capsule polysaccharide export protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAG ACAAGATGAA CAACCCTGCG ACGCCAAGGA CCTTCCTGTT CCTTCAGGGT
CCGTCGTCGC CGATCTTCGC CAAGATTGCC GGGCATCTCG AGGCCTTGGG CAACACCTGT
CTTCGCATCA ATCTCAATGT CGGCGACCGG ATATTCTGGC GCCGCCGGGG CGGCCAGGAT
TATCGTGGCT CGCTTGCCGA ATGGCCGGCT TTCGTGGAGA CCTTCATCCG CCGCCACTCC
GTCACCGATC TTGTGCTGCT TGGCGAAGAG CGCCCCTATC ATCGCACTGC CACAGCCGCC
GCGCGAAACG CCGGCATTCG CGTCTTCGTC GTCGAGATGG GATATCTCAG GCCCGACTGG
CTGACCCTCG AGCGCGGCGG CATGTCGTCA AACTCGCATT TTCCGACGGA CCCCGTGCAA
ATCCTGCGTG CATCGGCAGG ACTGCCCGAG CCGGACTGGA AGCGGCGTTA CCGTCAGACC
TTTATTGCCG AAGCTGCTTA CGACCTCCTC TACAATCTGC CGAACGTCTT TCTCTGTTTC
CTCTTTCCCG GCTATCGCCG TCACGCGATC TTCCACCCGC TTGCCGAATA TGCCGGCTGG
ATCCGGCGGC TGGCGACCGG CAGGGCTGAA CGGCGGAAGT CGGATGCACT GATCCGATCA
CTGGCCGGTG CAGGTGCGCC ATACTTCGTC TACCCGCTTC AGCTCGAAAC GGACTACCAG
TTGCGTGCGC ATTCACCTTT CAGCAGTCAG CGGGAAGCGA TCGACGCCAT CCTTGCCTCT
TTCGCGCGGC ATGCGCCCGC TGGAACCAGG CTGGCCATCA AGCTACACCC GCTCGACAAC
GGCCTGATCC CCTGGCGCAA GATCACTGCA GGCATCGCCG CCTCGCTCGG CATCTGGGAG
AGGGTTTTCT TTCTCGATGG AGGCAATCTC GACCTTCTCA TGCAGAACAG TTCCGGCATG
GTAACGGTCA ACTCGACCGC CGGACTGCAT GCCCTGAAGC AGGGCAAGCC CGTGAAGATC
CTGGGCACGG CGGTCTTCGA CATCGCCGGC CTGACGGATC AGCAGCCACT CGACCTTTTC
TGGGAGGCAC CACAGGCACC GGACCCCGCC CTGGCCACGG CAACGTTCAG GTTGATGGCC
GCTTCGATCC AGGTGCGCGG CAACTTCTAT TCCCGTGCAG GAACGGACGC CGGCGCCAAG
GCGATCGCCG AGCGCCTGCA TCGCAACGAT GTCAATGAGC CCGGTGCCTT CGTCGATCCC
CCGCCCCGGC AAAAGCCGGT GAAGATGAAG GATCAGGCGA CGCCGGCGCG CAGCAGATCG
TGA
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| Protein sequence | MTADKMNNPA TPRTFLFLQG PSSPIFAKIA GHLEALGNTC LRINLNVGDR IFWRRRGGQD
YRGSLAEWPA FVETFIRRHS VTDLVLLGEE RPYHRTATAA ARNAGIRVFV VEMGYLRPDW
LTLERGGMSS NSHFPTDPVQ ILRASAGLPE PDWKRRYRQT FIAEAAYDLL YNLPNVFLCF
LFPGYRRHAI FHPLAEYAGW IRRLATGRAE RRKSDALIRS LAGAGAPYFV YPLQLETDYQ
LRAHSPFSSQ REAIDAILAS FARHAPAGTR LAIKLHPLDN GLIPWRKITA GIAASLGIWE
RVFFLDGGNL DLLMQNSSGM VTVNSTAGLH ALKQGKPVKI LGTAVFDIAG LTDQQPLDLF
WEAPQAPDPA LATATFRLMA ASIQVRGNFY SRAGTDAGAK AIAERLHRND VNEPGAFVDP
PPRQKPVKMK DQATPARSRS
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