Gene Smed_0142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0142 
Symbol 
ID5320972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp155503 
End bp155976 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content61% 
IMG OID640789076 
Productactivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_001325837 
Protein GI150395370 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.255389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAG CATCTGCCGA CCATGCCGAC TTCACGATCG AACGCGTTGT CAAAGCACCG 
CCGGAAAAGG TCTTCGCGGC CTTCGCCGAT CCCGCGGCGC ATGACCGCTG GTTCGTGAAA
GCCGACAATT GGCCAGTCGC GGAATATAGC CACGACTTCC GTGTCGGCGG GCGGGAAGGC
GGCCGTTTCA GCCAAGACGG GAAGACTTTC TACTTCAACG AGACGGTCTA TCTCGACATC
GTCGAGAACA GGAGGATCGT CTCAGCTTAC ACGATAGCAC AAGATTACCG GCGCATCTCC
GCCTCCATCG CAACCGTCGA CCTTATTCCG GAAGGCACCG GCACACGGGT CGTCTTCACC
GAGCAGGCGG CGTTCCTGGA TGGGCTCGAT AAGGTCGAAC ATCGCCGCGA GGGCTGGGAG
CAGCTGATAG GATTTCTTGC GGCCGAGCTC GGCGAACGGG CCGATCTCGC CTGA
 
Protein sequence
MTAASADHAD FTIERVVKAP PEKVFAAFAD PAAHDRWFVK ADNWPVAEYS HDFRVGGREG 
GRFSQDGKTF YFNETVYLDI VENRRIVSAY TIAQDYRRIS ASIATVDLIP EGTGTRVVFT
EQAAFLDGLD KVEHRREGWE QLIGFLAAEL GERADLA