| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0140 |
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| Symbol | |
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| ID | 5320970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 153714 |
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| End bp | 154838 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640789074 |
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| Product | sodium/calcium exchanger membrane region |
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| Protein accession | YP_001325835 |
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| Protein GI | 150395368 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0387] Ca2+/H+ antiporter |
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| TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.414584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACG AAAGCTTCAC TCCGGACGAA GAGGCGTGCT TGCTTGCAAT CCTGAGATCG
GAACGGCATC TCGTTGCCGC TTTTCTTGCT GCTCTCGCCG GCGTTGCGCT CGAGCATCAT
CTGCTCGAAG CCGGTCGCGC TGCATCGCTC ATGGGTGCGG CCCTGATGGT GGCGGCGATC
GTGCTTGCTT CCATGCGGGT CGCCCACCAT GCCGAAGTGC TGGCCGCCAA GGTGGGCGAT
CCCTATGGCA CGATGATCCT GACGCTCTCG GCGGTCCTTG TCGAGGTAAT CATCCTCGCC
ATCATGATGA CGGGCGAGAC CTCTCCGACA CTGGTGCGCG ATACGATCTA TTCGGCCGTC
ATGCTCGACG TCAACGGGAT ACTGGGTCTT GCGGCACTGC TCGGCGGCCT CAAGCATGGG
GAGCAGCCCT ATAACGACGA CTCGGCCCGC ACCTACAGTG TCATGATCCT TACCGCCATG
GGCATTTCCA TGCTCGTTCC CGAATTCGTG CCTCAGTCGA AATGGCACTA CTATTCCGCC
TTCACCATTG GCGCGATGAT CGTTCTTTAC ACCCTTTTCC TCAGAATGCA GGTGGGCGTG
CACAGCTACT TCTTCAGTTA CAGCTATCCG CGTGCCAAAG CGGGAAGTGC TGCAAGCCGG
CTGGAAGGCG AGCCGGTGCT TCCTTCCGTC GTGGTGCTCG TCCTGGGCGT GATCGTGATC
GGCTTTCTCG CCGAAATCAT GTCCGGGCTG CTTTCGGCAG GCATCAAGGG CACGGCCGCG
CCGCCGGCAT TGGCGGCGAT CGTGGTTGCG GCGATCTCCG CGTCGCCCGA GGTCATGACG
GCACTACGCG CGGCTCTTGC CAATCGCATG CAGGCAGTGG TGAACATCGC GCTCGGCGCT
TCGCTTTCGA CTGTGATTCT GACCGTGCCG GTCATGGAGG CGATCGCGCT TTATACCGGT
CAGCCCTTCA TCATGGCCAT GTCCCCGGTG CAGACGGTGA TGGTCGCGGT CACGCTCATT
GCCGCCGCAA TCAACCTGAA TGACGGCCAG ACCAATGCCA TCGAAGGCAT GACTCATTTC
GTGCTCTTCG CGACCTTCAT CATGCTTTCG GCTCTGGGGC TCTAG
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| Protein sequence | MMNESFTPDE EACLLAILRS ERHLVAAFLA ALAGVALEHH LLEAGRAASL MGAALMVAAI
VLASMRVAHH AEVLAAKVGD PYGTMILTLS AVLVEVIILA IMMTGETSPT LVRDTIYSAV
MLDVNGILGL AALLGGLKHG EQPYNDDSAR TYSVMILTAM GISMLVPEFV PQSKWHYYSA
FTIGAMIVLY TLFLRMQVGV HSYFFSYSYP RAKAGSAASR LEGEPVLPSV VVLVLGVIVI
GFLAEIMSGL LSAGIKGTAA PPALAAIVVA AISASPEVMT ALRAALANRM QAVVNIALGA
SLSTVILTVP VMEAIALYTG QPFIMAMSPV QTVMVAVTLI AAAINLNDGQ TNAIEGMTHF
VLFATFIMLS ALGL
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