| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0127 |
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| Symbol | argD |
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| ID | 5320956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 140812 |
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| End bp | 142011 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640789060 |
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| Product | acetylornithine transaminase protein |
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| Protein accession | YP_001325822 |
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| Protein GI | 150395355 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.383449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCAA CCACGCCGCT TTACGACACC TATATGCGCG CGCCGTTGCG TTTCGAGCGA
GGTGAAGGCG TTTGGCTGAT TGCCGAAGAC GGCACGCGTT ATCTCGACTT CGCCGCCGGC
GTTGCCGTGA ATTCGCTCGG TCATGCCCAC CCGCATCTCG TCGAGGCATT GAAGGCGCAG
GCCGACAAAG TCTGGCATCT GTCCAATCTC TACGAGATCC CGGGCCAGGA AAGCCTTGCA
CGCCGGCTGA CCCAGGTCAC GTTCGCCGAC CGGGTGTTCT TCACCAATTC GGGTGCGGAA
GCACTCGAAT GCGCGATCAA GACGGCCCGG CGCTACCACT ACGCCAAGGG GCATGTCGAG
AAGTTTCACG TCATCACCTT CGAAGGTGCT TTTCATGGCC GCACGATCGC GACGATCGCC
GCCGGCGGTC AGCAGAAGTA TATCGAAGGC TTCGGCCCGA AGGCGCCGGG TTTCTATCAG
GTCCCCTTTG GAGATATCGC TGCGGTCAAG GACGCGATCA ATGACGAAAC GGCGGCGATC
CTGGTCGAAC CGATCCAGGG CGAGGGGGGC ATTCGGCTGG CGCCGAAAGA GTTCATGCAA
GGGCTGCGCG AACTCTGTGA CGAGTTCGGT CTGCTTCTCA TCCTAGACGA GGTCCAGTCA
GGGGTCGGCC GCACCGGCAA GCTCTTCGCC CATGAATGGG CGGGGATAAA GCCGGATATC
ATGGCCGTCG CCAAAGGCAT TGGCGGCGGC TTCCCGCTCG GCGCCTGCCT TGCGACGGAA
GCGGCTGCCG CCGGTATGGC TGCAGGCACG CACGGTTCGA CCTATGGTGG CAATCCGCTT
GCGATGGCGG TCGGAAATGC AGTGCTGGAC GTCGTTCTCG CGGAAGGCTT CCTCGAGCAC
GTGCGCGAGG TGGCGCTAGT CTTCCGTCAG GGGCTCGCTT CCCTGAAGGA TCGTTTTCCC
GACGTTATCG AGGAAATCCG AGGCGACGGG CTTATGCTAG GCATCAAAGC GAAGGTCCCT
ACGGCGGATC TCCTGAAGGC AATCCGCGAT GAGAAGCTGC TCGCCGTTCC GGCCGGCGAA
AACGTGCTGC GCCTGTTGCC GCCGCTGATC ACCACCCCGG CCGAGGCGCG CGAGGGGCTG
GCGCGGCTCG AGCGCGCCGC GGAAACGATG GCCGGCAAGA GCGGGCACGC CGCGGCTTAA
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| Protein sequence | MAATTPLYDT YMRAPLRFER GEGVWLIAED GTRYLDFAAG VAVNSLGHAH PHLVEALKAQ
ADKVWHLSNL YEIPGQESLA RRLTQVTFAD RVFFTNSGAE ALECAIKTAR RYHYAKGHVE
KFHVITFEGA FHGRTIATIA AGGQQKYIEG FGPKAPGFYQ VPFGDIAAVK DAINDETAAI
LVEPIQGEGG IRLAPKEFMQ GLRELCDEFG LLLILDEVQS GVGRTGKLFA HEWAGIKPDI
MAVAKGIGGG FPLGACLATE AAAAGMAAGT HGSTYGGNPL AMAVGNAVLD VVLAEGFLEH
VREVALVFRQ GLASLKDRFP DVIEEIRGDG LMLGIKAKVP TADLLKAIRD EKLLAVPAGE
NVLRLLPPLI TTPAEAREGL ARLERAAETM AGKSGHAAA
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