| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0063 |
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| Symbol | |
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| ID | 5320890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 71262 |
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| End bp | 72470 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640788994 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001325758 |
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| Protein GI | 150395291 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCGA CAGTAACCCG CCGGGTCCTG TGGGGCGCCG GTTTGAGCAT TCTTTTGTCC
GTCGGCGGCG GCGCAGCCGT CTTCTTCGGA CTGCCTCAGC GCTTTCATGC GGACGCCGCG
GTCGAGGCGC CCGCTGCCGC GGCTCCAGCC GTTCCGGTCT CCGTCGCCAA GGCCGAGTCG
AGACGGATCA CGACCTGGGA GAGCTTCTCC GGCCGTCTTG AAGCGATCGA GCGCGTCGAG
GTCCGTCCCC GCGTCGGCGG CGCGATCCTG AGCGCTCACT TCCGCGAAGG GGCCCTGGTC
GAAAAGGGAG ATCTGCTGGT CACCATCGAC CCCGAGCCCT TCGCCGCTGC AGTCGAGCGG
GCCGAGGCGC AGGTTGCCGC CGCCGAAGCG CGTGTCGCGC TCGCTAAAAC CGAGCTCGAA
CGCGGCCGCA AGCTGGTGAC CACGAGCGCG ATCCCGCAGA GCGGCGTCGA CCAGAGGCTT
AGCGTTTACG ACGAGGCCCA GGCCAACCTC CGCTCTGCGA AGGCTGCCCT GCGGACCTCC
AAACTCGACC TAGCCTACAC CGAAGTGCGC GCGCCGATCA GAGGCCGTGT CGGAGGACTC
AATGTGACGG CCGGCAATCT CGTCTCTGCC GGCTCCGCCT CGCCGGTCCT GACGACGCTC
GTCTCGGTCG ACCCCATCTA TGCGAGCTTC AACGTCAGCG AGGAAGTCGT CGCGACCGCG
CTGGCAGAAC TTTCCGCCTC GGCCGGCAGC ATCGAAGCGA TCGAGCGCAT CCCGGTCGAG
ATCGGCACGG CCGCCGACGA GGGGACGCCG ATTACAGGCC ACATTCAGCT CATCAACAAC
GAGGTGGACG CGGCAACCGG CACAATTCGG CTGCGGGCGG AACTCGCCAA TGCCGACGGC
CGCCTGATCC CGGGTCAATT CGTGCGTATC CGGATCGGAG ATCCGCAGCC GGAGGAAAAG
CTGGTGATCA GCGACCGCGC CATCAGTTCG GATCAGGACA AGAAATTCGT CCTGGTCGTC
GGGGCTGACA ACAAGGTGGA GTATCGCCAG GTCACCCTCG GACCCGTCGC CGACGGTCTT
CGGATCGTGG AGAACGGGCT GAAGCCCGGC GAGAGCATCG TCGTCAACGG CCTGCAGCGC
GTACGCCCCG GTGTAGTCGT CGCCCCGCAG CCGGTCGAAC AGGCAACCGC CTCGATCGCC
AAACCATAG
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| Protein sequence | MTSTVTRRVL WGAGLSILLS VGGGAAVFFG LPQRFHADAA VEAPAAAAPA VPVSVAKAES
RRITTWESFS GRLEAIERVE VRPRVGGAIL SAHFREGALV EKGDLLVTID PEPFAAAVER
AEAQVAAAEA RVALAKTELE RGRKLVTTSA IPQSGVDQRL SVYDEAQANL RSAKAALRTS
KLDLAYTEVR APIRGRVGGL NVTAGNLVSA GSASPVLTTL VSVDPIYASF NVSEEVVATA
LAELSASAGS IEAIERIPVE IGTAADEGTP ITGHIQLINN EVDAATGTIR LRAELANADG
RLIPGQFVRI RIGDPQPEEK LVISDRAISS DQDKKFVLVV GADNKVEYRQ VTLGPVADGL
RIVENGLKPG ESIVVNGLQR VRPGVVVAPQ PVEQATASIA KP
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