| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0044 |
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| Symbol | lnt |
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| ID | 5320871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 45522 |
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| End bp | 47153 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640788975 |
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| Product | apolipoprotein N-acyltransferase |
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| Protein accession | YP_001325739 |
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| Protein GI | 150395272 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0815] Apolipoprotein N-acyltransferase |
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| TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00386393 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000000481156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCCTTGCC CACGACCGGC GCCGACTGGA GGTTCAATGG AAAGACTGGC AGGCAGAATC
ATACTTCTCT CCGGGGTGTC GCGGGCATTC GTCGGTTTTC TCGCCGGCCT CCTGGCGGTG
CTTGCCCAGC CGCCATTTGG CATTTTCGCG GCGGCTTTCG TCTCTTTTCC AGTCCTCGTC
TGGCTGATCG ACGGGGTGGC GCCCGATCCC TCCGACGGCG CATTCCGGCG GCTGAGGCAG
CCCGCCGCAA TCGGCTGGTC CTTCGGCTTC GGCTATTTTC TGGGCGGTCT CTGGTGGCTG
GGCAATGCGC TCCTGGTCGA AGCGGACGCG TTCGCCTGGG CGATACCCCT TGCCGTCGTC
GGCCTTCCAG CCGTTCTCGG GGTTTTTTAC GCGCTGGCGG TCGTCATTGC CCGCTGTCTT
TGGTCCGACG GCTGGGGCCG GATCGCTGCC CTTGCGCTCG GCTTCGGCAT CGCCGAATGG
CTCCGCGGTT TTGTTTTTAC CGGCTTTCCG TGGAATGCCA TCGGTTATGC GGCCATGCCG
ATGCCGTTGA TGATGCAGTC GGCAAGCGTC GTCAATCTCT CAACGATCAA CATGCTGGCC
GTCTTTGTGT TCGCCGCTCC TGCTTTGATC TGGACGGGCA AGGGCGCGCG CACCGGCCTT
GCCATCGCGG TAGCGCTCTT TACGGCGCAT ATCGCATTCG GCTTCTACCG GCTCGCTCAG
CCGGCGCCGC CGTCGGCTGC ACCGCAAATG GCGGTACGCG TCGTACAGCC GGTCATCGAC
CAGGCCAAAA AGCTCGACGA CCGCGAGCGC GCCTCGATCT TCGAGGACCA CCTCTCATTG
ACGGCCGCCC CGGTTCAAGG TGGCGGCAAG CGTCCGGACA TCGTCGTTTG GCCGGAAACG
TCGATCCCTT TCATCCTCAC CGACAATCCC GACGCGCTGG CGCGGATCGC GGAGGTTCTC
AAGGATGGGC AGATACTCGT CGCCGGCGCC GTCAGGGCCG AGGATGCAGG CGCCGGGCTG
CCGTCGCGCT ACTATAACTC TGTCTATGTT ATTGACGACC GGGGCCAGAT CATTGGCGCG
GCGGACAAGG TGCATCTGGT GCCGTTCGGT GAATATCTCC CCTACGAGGA CCTGCTGACG
TCCTGGGGCT TGAGTTCCAT CGCGGCTTCG ATGCCGGGCG GCTTCTCGGC AGCCAGGATG
CGCCCTGTGC TCACTTTGCC GGGCGGCAGA AGACTTTACC CGATGATCTG TTACGAGGCG
ATCTTTGCCG ATGAGGTGGA CGCCAATGCG CGCCTCGCCG ACGTGCTCCT CAATGTCACC
AACGATGCCT GGTTCGGTGA CACGCCAGGT CCGCGCCAGC ATTTCCATCA GGCGCAGCTC
CGCGCGGTTG AAACCGGAAT TCCCATGATC CGCGCTGCGA ATACTGGTAT TTCAGCAGTT
GTTGATGCAC GTGGTGTTTT AGTGTTAGTA TTAGGCTACA ATTACAGGGG TGTTTTAGAC
ACAATTCTGC CGGGAAAACT GCCTACGCTA ACGGACGTCC CGACGCGCAG CCGGATTTTT
TGGTTGTCGA TGGCTATTCT ATCTATAGTT GCATCATTCT CGCGTTTTGG TTTCAATATT
AGGAAGAATT GA
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| Protein sequence | MPCPRPAPTG GSMERLAGRI ILLSGVSRAF VGFLAGLLAV LAQPPFGIFA AAFVSFPVLV
WLIDGVAPDP SDGAFRRLRQ PAAIGWSFGF GYFLGGLWWL GNALLVEADA FAWAIPLAVV
GLPAVLGVFY ALAVVIARCL WSDGWGRIAA LALGFGIAEW LRGFVFTGFP WNAIGYAAMP
MPLMMQSASV VNLSTINMLA VFVFAAPALI WTGKGARTGL AIAVALFTAH IAFGFYRLAQ
PAPPSAAPQM AVRVVQPVID QAKKLDDRER ASIFEDHLSL TAAPVQGGGK RPDIVVWPET
SIPFILTDNP DALARIAEVL KDGQILVAGA VRAEDAGAGL PSRYYNSVYV IDDRGQIIGA
ADKVHLVPFG EYLPYEDLLT SWGLSSIAAS MPGGFSAARM RPVLTLPGGR RLYPMICYEA
IFADEVDANA RLADVLLNVT NDAWFGDTPG PRQHFHQAQL RAVETGIPMI RAANTGISAV
VDARGVLVLV LGYNYRGVLD TILPGKLPTL TDVPTRSRIF WLSMAILSIV ASFSRFGFNI
RKN
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