Gene Smed_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0036 
Symbol 
ID5320863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp38024 
End bp38590 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content60% 
IMG OID640788967 
Productscaffold protein Nfu/NifU 
Protein accessionYP_001325731 
Protein GI150395264 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0694] Thioredoxin-like proteins and domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0881083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000181724 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCATCC AGACCGAAGC GACGCCGAAC CCGGCCACTT TGAAGTTCCT GCCGGGCAAG 
GTCGTGATGG AGAACGGCAC CGCTGAATTC CGCAGCGAAG AGGAGGCCCT TGCAGGATCG
CCGCTTGCAG CCCGGCTCTT TTCGATCCCC GGCATTACCG GGGTCTATTT CGGCTATGAC
TTTATCACCG TGAGCAAGGA AGCGCAGGAG TGGCAGCACC TGAAGCCTGC AATCCTGGGC
TCGATCATGG AGCATTTCAT GTCGGGGCAA CCGATCATGT CGGGTGCCGG TCGGGCGGAA
CAGCTCGACG AGGATGAGGA ATTCTTCGAC GAGGGGGATG AGGCAATCGT CGCGACGATC
AAGGAACTGC TCGAGACGCG CGTACGACCG GCAGTCGCCC AGGACGGCGG CGATATCACC
TTCCGCGGCT TCAAGGACGG AACCGTATTC CTCAACATGA AAGGTGCATG CTCCGGCTGC
CCCTCCTCGA CCGCGACCTT ACGACATGGC GTGCAGAACC TGCTGCGTCA CTTCGTTCCG
GAAGTCGAAT CGGTCGAATC CGTTTGA
 
Protein sequence
MFIQTEATPN PATLKFLPGK VVMENGTAEF RSEEEALAGS PLAARLFSIP GITGVYFGYD 
FITVSKEAQE WQHLKPAILG SIMEHFMSGQ PIMSGAGRAE QLDEDEEFFD EGDEAIVATI
KELLETRVRP AVAQDGGDIT FRGFKDGTVF LNMKGACSGC PSSTATLRHG VQNLLRHFVP
EVESVESV