Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0036 |
Symbol | |
ID | 5320863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 38024 |
End bp | 38590 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640788967 |
Product | scaffold protein Nfu/NifU |
Protein accession | YP_001325731 |
Protein GI | 150395264 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0694] Thioredoxin-like proteins and domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0881083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0000181724 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCATCC AGACCGAAGC GACGCCGAAC CCGGCCACTT TGAAGTTCCT GCCGGGCAAG GTCGTGATGG AGAACGGCAC CGCTGAATTC CGCAGCGAAG AGGAGGCCCT TGCAGGATCG CCGCTTGCAG CCCGGCTCTT TTCGATCCCC GGCATTACCG GGGTCTATTT CGGCTATGAC TTTATCACCG TGAGCAAGGA AGCGCAGGAG TGGCAGCACC TGAAGCCTGC AATCCTGGGC TCGATCATGG AGCATTTCAT GTCGGGGCAA CCGATCATGT CGGGTGCCGG TCGGGCGGAA CAGCTCGACG AGGATGAGGA ATTCTTCGAC GAGGGGGATG AGGCAATCGT CGCGACGATC AAGGAACTGC TCGAGACGCG CGTACGACCG GCAGTCGCCC AGGACGGCGG CGATATCACC TTCCGCGGCT TCAAGGACGG AACCGTATTC CTCAACATGA AAGGTGCATG CTCCGGCTGC CCCTCCTCGA CCGCGACCTT ACGACATGGC GTGCAGAACC TGCTGCGTCA CTTCGTTCCG GAAGTCGAAT CGGTCGAATC CGTTTGA
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Protein sequence | MFIQTEATPN PATLKFLPGK VVMENGTAEF RSEEEALAGS PLAARLFSIP GITGVYFGYD FITVSKEAQE WQHLKPAILG SIMEHFMSGQ PIMSGAGRAE QLDEDEEFFD EGDEAIVATI KELLETRVRP AVAQDGGDIT FRGFKDGTVF LNMKGACSGC PSSTATLRHG VQNLLRHFVP EVESVESV
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