Gene Smed_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0005 
Symbol 
ID5320832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp5026 
End bp5508 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content60% 
IMG OID640788936 
Productactivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_001325700 
Protein GI150395233 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.341386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000491866 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGCAG CGACTGACGC AAAATCCACC AGCGAACGGG AACTGGTTCT CACCCGCCTG 
ATCGATGCCC CGCGGGAGAA GGTCTACCAG GCCTTCACGG AAGCGGCGCT ATTGAAGCAG
TGGTTCGCCC CTTTGCCGTG GACGATCACG GAAGCGGAAC TCGACGTCAG GGCAGGCGGT
ACCAACCGTT TCGTCATGCG CTCGCCGGAA GGGGAACTCT ATCCCAATCA GGGCGTCTAC
CTGGAAGTCG TGCCGAACGA GAAGATCGTC GTCACCGATG CCTTCACGCA AGCCTGGATA
CCGTCCGACA AACCGTTCAT GACCGCGATC ATGACCTTCG AAGATGAAGG CGGCAAGACC
CGTTACACGG CGCGTGCGCT TCACTGGAAC GTCGAGGATC GCGAAGCGCA TGAGAAAATG
GGTTTCCACG AGGGCTGGGG CCAATGCGCC GATCAGCTCG CCGCTCTCGT CGCAAAACTC
TAG
 
Protein sequence
MTAATDAKST SERELVLTRL IDAPREKVYQ AFTEAALLKQ WFAPLPWTIT EAELDVRAGG 
TNRFVMRSPE GELYPNQGVY LEVVPNEKIV VTDAFTQAWI PSDKPFMTAI MTFEDEGGKT
RYTARALHWN VEDREAHEKM GFHEGWGQCA DQLAALVAKL