Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0005 |
Symbol | |
ID | 5320832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 5026 |
End bp | 5508 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640788936 |
Product | activator of Hsp90 ATPase 1 family protein |
Protein accession | YP_001325700 |
Protein GI | 150395233 |
COG category | [S] Function unknown |
COG ID | [COG3832] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.341386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000491866 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTGCAG CGACTGACGC AAAATCCACC AGCGAACGGG AACTGGTTCT CACCCGCCTG ATCGATGCCC CGCGGGAGAA GGTCTACCAG GCCTTCACGG AAGCGGCGCT ATTGAAGCAG TGGTTCGCCC CTTTGCCGTG GACGATCACG GAAGCGGAAC TCGACGTCAG GGCAGGCGGT ACCAACCGTT TCGTCATGCG CTCGCCGGAA GGGGAACTCT ATCCCAATCA GGGCGTCTAC CTGGAAGTCG TGCCGAACGA GAAGATCGTC GTCACCGATG CCTTCACGCA AGCCTGGATA CCGTCCGACA AACCGTTCAT GACCGCGATC ATGACCTTCG AAGATGAAGG CGGCAAGACC CGTTACACGG CGCGTGCGCT TCACTGGAAC GTCGAGGATC GCGAAGCGCA TGAGAAAATG GGTTTCCACG AGGGCTGGGG CCAATGCGCC GATCAGCTCG CCGCTCTCGT CGCAAAACTC TAG
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Protein sequence | MTAATDAKST SERELVLTRL IDAPREKVYQ AFTEAALLKQ WFAPLPWTIT EAELDVRAGG TNRFVMRSPE GELYPNQGVY LEVVPNEKIV VTDAFTQAWI PSDKPFMTAI MTFEDEGGKT RYTARALHWN VEDREAHEKM GFHEGWGQCA DQLAALVAKL
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