| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_1483 |
|---|
| Symbol | |
|---|
| ID | 5326589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | - |
|---|
| Start bp | 1543531 |
|---|
| End bp | 1545099 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640788907 |
|---|
| Product | seryl-tRNA synthetase |
|---|
| Protein accession | YP_001325671 |
|---|
| Protein GI | 150401905 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0172] Seryl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00415] seryl-tRNA synthetase, Methanococcus jannaschii family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTG AATTAAATGG TAAAATTATA TTTAGTAAGG AAATTACTGA TGATGCCAAA
AAAGATATAA TTGAAGTATT GAATGATAGA ACCATATTAT TAAAAGGAGT GCCTACTGGA
AAAGAGGAAG AAGCTTCAAA AATAGTAAAT TATGAATTTA AAGGCAATGA ATTAATATTA
AACATAATTT CAGGCACTTA TGCGAGAGCC CATGAGGCAA TTATTAGATT AAAAAAACCA
ATAATGGAAA AAGTTGGGAA AATTCACAAA ATGGGAATAA GAGATATAAA AATAGATAAT
TACGAAATAA CAATTAATGC CCCCCACAAT ATAGATGCCC TTGAAAATTT AAAAGTACCA
GAATGTGAAA CAGAATTAAA CGAAGAAGAA AATACTATAA AAATCATATT TAAAAATATT
GGAGATAGTG AATTAAAAAG AAATATTGTA GATAGAGCAA TTAAATTTGT AAAAACAGAA
ATTGACAACA TTGGAGATAG TGGCGAAGAG TGCGATTTAA CTTATGAAGT GTGTGGAATA
GCTCCAAATA CAATTGTATC AGAATATAAG GCAGAAAGAA CAATATCATA TAATAAAGAC
CCAACAGAAG AAAGCGAAAA ATTAGGCTGG GTTAAGCGAT TTTCTGGAAA AGGTCAATGG
TTTTACACTC CACCAATGAC TAAATTATTA AGGGCTTTTG AGGAGCTCCT TATGGAAGAA
TGCATAAATA AAATTGGATT TGATGAATGT TTATTCCCAA AACTTATTCC ATTGGAAGTT
ATGTACAAAA TGAGATATTT GGAAGGGCTT CCTGAGGGAA TGTATTATGT ATCTCCGCCA
AAAAGAGACC CAGAGATGTT TAAAGAGTTT GTAAATGAAA TGATGATTAA AAATGAAATC
CCAATACATA AATTAAAAGA CCTTCTTAGA AATCCGGGGT ATGTGTTGGC ACCTGCCCAA
TGTGAGCCAT TCTATCAATT CTTTGACCAT GAATTAGTGG ATATTGATAA TCCAGTTAAA
TTTGTGGATA AAAGTGGCTG GACATACAGA TGGGAAGGAG GAGGCTCAAA AGGGCTTGAT
AGAGTTCATG AATTTTTAAG AATAGAAACA GTTCAAATGG GAGCTCCTGA ATTTGTAAAT
AGCGTAAGAG ATGACACATT GAAATATGCC GAAAAACTTG CTGAAAAACT TGATTTAGAG
TATTGGACCG AGGTAGGAGA CGACCCATTT TATTTAGAGG GAAGGAAAAA AGAGGAAAGA
AACATAGAAT TCCCAGAAGT TCCAAAATAT GAAATGAGAT TATGGCTCCC TCATGTAAAA
GATGAAAGAA AAGGAGTTGC CGTAACATCA GCAAATGTTC ATGGAACTCA TTTTGTAGAA
GGATTTGGTG TAAAAGATTA CAAAAACAGA ACGGTATGGA CAGGATGCAC AGGATTTGGG
CTTAGTAGAT GGGTAATAGG ATTTTTGGCA CAATATGGAT TTGACTACAA CGACTGGCCG
GAATTAATTA AAGATAAAAT TGGAGAAATG CCAAATATAC CAAAAGTAAT TACTTGGCCT
AAAAAATAA
|
|---|
| Protein sequence | MKFELNGKII FSKEITDDAK KDIIEVLNDR TILLKGVPTG KEEEASKIVN YEFKGNELIL
NIISGTYARA HEAIIRLKKP IMEKVGKIHK MGIRDIKIDN YEITINAPHN IDALENLKVP
ECETELNEEE NTIKIIFKNI GDSELKRNIV DRAIKFVKTE IDNIGDSGEE CDLTYEVCGI
APNTIVSEYK AERTISYNKD PTEESEKLGW VKRFSGKGQW FYTPPMTKLL RAFEELLMEE
CINKIGFDEC LFPKLIPLEV MYKMRYLEGL PEGMYYVSPP KRDPEMFKEF VNEMMIKNEI
PIHKLKDLLR NPGYVLAPAQ CEPFYQFFDH ELVDIDNPVK FVDKSGWTYR WEGGGSKGLD
RVHEFLRIET VQMGAPEFVN SVRDDTLKYA EKLAEKLDLE YWTEVGDDPF YLEGRKKEER
NIEFPEVPKY EMRLWLPHVK DERKGVAVTS ANVHGTHFVE GFGVKDYKNR TVWTGCTGFG
LSRWVIGFLA QYGFDYNDWP ELIKDKIGEM PNIPKVITWP KK
|
|---|
| |