| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_1452 |
|---|
| Symbol | |
|---|
| ID | 5327162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | + |
|---|
| Start bp | 1510319 |
|---|
| End bp | 1511554 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640788875 |
|---|
| Product | putative ABC-2 type transport system permease protein |
|---|
| Protein accession | YP_001325640 |
|---|
| Protein GI | 150401874 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.75331 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAG ATAATATCAA GAAAATTTAC AAAAATCAAA GATTTTTGAA TTCTCTAACA
AAAATAAAGG CAATAGCAAA ACGAGAAATA TTAAGCAATA TCAAACGGAA GCAGTTTATT
TTAATGATTT TACTTGTTCC GGTTGTGATG ATATTAATTA CAATGGCTAC GGCATATTTT
ACAGCGGAAG TTGAAGACCA AAAAATAGGA TATATTGATA ACTTTGGAAT GGATATTCCG
CCCCTGTTTA AATCATTTAA TCCACTTAAA CAGGAAAATA TCACGATGCA ATTTATAAAA
TATAATAATA CGGAAATCGG AAAAAATGCC GTAATAAATG GGGATATCAA TGCATTTATA
ATAATTCCTA AAAATTATCT TGAAAATGAA CCTATGACTA TTTATTCAAA ATCAAAAACA
ATCCCCTCAA TTATAAGGAG CTCCATAAAA GATATTGTAT TATCCACAGT ATTAAAGGAC
AAAGTAGATG AAAAAACATA TAATATTGTA AAATCACCGA TTAATCTTGA AATATACAGT
ATAAGCAAAA AAGGAGAGGA AAAAGAAAAT ATAATTTCTC AAATGATGCC ATTTGGCTTT
GCCATGCTTT TATATATTGC CATAATTTCC GTATCTGGAC TATGCACCAA CAGTGTAATT
GAAGAAAAAC AGCATAGAAT CATGGAACTC CTGCTTACAA CAACAAATTC AACAAATATA
TTGATTGGAA AAATAATTGG AATATCATTT TTAGGATTAA TTCAAATGAG TATATGGATT
TTATTTGCCC TCCCAATTAT ATCTATGGTA GCATTGAAAA TTCCGCCGTT TTTAATGGTT
TCCGCGGTTG TGTTCTTTGT AATGGCATAT TTATTTTATG TGTCATTGTT AAGTGGGCTA
TCCTCATTAT TTACGACTCA AAAAGATGCG GGGCAGATTA TAAGTCCGAT TATAATGGTG
CAAATAATAC CTTTATTAAT TCTTACGCTA ATTCAATCTA ATCCAAATCA TTACATTATT
AAAATATTGT CATTTGTTCC TTTCACAGCT CCGCAAGTTA TGCTTATGAG AATGAGTATA
ACTCACATAG AACCTTTGGA GGTTTATTTA TCTATGGGTG TTATGTTTAT ATTTACGGTA
TTATCTTTCA TATCAGCCGT GAAATTATTT AAAATAGGTT CTATGATTTA CGATGAGGAA
ATGACAATTA AAAAAGTAAT TAAAATTATC AAATAA
|
|---|
| Protein sequence | MDKDNIKKIY KNQRFLNSLT KIKAIAKREI LSNIKRKQFI LMILLVPVVM ILITMATAYF
TAEVEDQKIG YIDNFGMDIP PLFKSFNPLK QENITMQFIK YNNTEIGKNA VINGDINAFI
IIPKNYLENE PMTIYSKSKT IPSIIRSSIK DIVLSTVLKD KVDEKTYNIV KSPINLEIYS
ISKKGEEKEN IISQMMPFGF AMLLYIAIIS VSGLCTNSVI EEKQHRIMEL LLTTTNSTNI
LIGKIIGISF LGLIQMSIWI LFALPIISMV ALKIPPFLMV SAVVFFVMAY LFYVSLLSGL
SSLFTTQKDA GQIISPIIMV QIIPLLILTL IQSNPNHYII KILSFVPFTA PQVMLMRMSI
THIEPLEVYL SMGVMFIFTV LSFISAVKLF KIGSMIYDEE MTIKKVIKII K
|
|---|
| |