| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_1312 |
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| Symbol | |
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| ID | 5326683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus aeolicus Nankai-3 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009635 |
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| Strand | - |
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| Start bp | 1371310 |
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| End bp | 1374132 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640788725 |
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| Product | replication factor C small subunit |
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| Protein accession | YP_001325500 |
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| Protein GI | 150401734 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0470] ATPase involved in DNA replication |
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| TIGRFAM ID | [TIGR01443] intein C-terminal splicing region
[TIGR01445] intein N-terminal splicing region |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.425984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAC CATGGGTTGA AAAATACCGT CCAAAAACAT TGAATGAGAT TACAGGACAT
GATGCCATTA TAACCCGCCT TAAAAATTAT GTAGAAAAAG AATCCCTCCC ACATATGCTA
TTCAGTGGTC CGCCGGGTTT AGGCAAAACG ACATCTGCAT TGTGCCTTGC AAAGGATTTA
TACGGCGATA CTTGGAAAGA TAATTTTTTG GAACTCAACA GTTCCGACGA AAGAGGTATT
GATGTGGTGA GAACAAAAGT AAAAAACTTT GCAAGAACAA AACCTATTGG AGATGCACCA
TTTAAAATAA TATTTTTGGA TGAAAGTGAT GCCCTAACAA GTGATGCCCA AAATGCCCTT
AGAAGAACTA TGGAAAAATA TTCGGATATA TGTAGGTTTA TATTGAGTTG TTTAACTGAA
AATGCTAAAA TATACACTGC TGACGAGAGA GAGCTAAAAA TCAGTGATTA TTTAAAACTA
TTCGAAGAAA GAAAAATTAA AACTGTTTTA AATAGAAATG GGGAAGACTT GGTTTTAGCA
GGAGTTAAAT ACAACTCAGA AATGGTCGGA CATCCAGTAT ATAAAATCAC TCTTGAAAGT
GGTAGAACCA TCGAAGCAAC AGAAGACCAT AAATTTTTAA CAAATAACAG ATGGATGAAA
ATATCTCAAT TAAATGAAGG AGATGAGCTT CTAATATACC CTACACTTGA AGGGGTTGAA
TATAAGGAGG ACAGTAGAAA AATAATAAAT CTTAAAGATT TCTACAATTT CCTTGAAGAA
ATTGAATTGC AGGGCAACTA TAAGAGATTA GGAGAAGCGG ATGAATTTAG CCAATTAACC
ACAAAGGATA AAGAAGTAAT ATTAAATAGA GCTCTGGAAC TTTATGCAAA ATTACATGAA
GGGCTAACCG ATAGAGAATG TGAAATATTA AATTCAATTC CAGAGGAGGG TATAAGTAGG
GAGGAGCTCC AAAAAACAGT TGGTCTTTCA AGAGGTAGGT TAAATCAAAT ATTGCAGAAC
ATTGAAAATA AAAAGTATAT CAACAGGAAC ATAAATAAAT CCAAAAAAAC TCAATTCATA
AAAAATACCT CTAAAAACTC ACCAATAATC CTAAGAAATA TAATGGATAT TAAACGAATA
ATTGAAAGAG AGCATAATAT AAAAATAAGC TATACTGCAT TTAAAAAATT ATTAAATCAT
GGAGTTAAAG GCTTTGCACA AAACCATATA AAAAATATCA AAGAAAGAAA CTGGGACAGT
ATAACCTATG ATAGCAAGAA CGCAGGAATG TTTGCAAGAT TAGTTGGTTT TATAATTGGA
GATGGGCACT TAGCAAAAAC TGAGGAAAAA AGAATTGTAA TTACCTCAAC TAATAATGAG
TTGAAACAAA TAATAAACGA TTTAACAGAG CTCAATATCA AATGCTCAGG AATAATAGAA
AAAGAAATAA CCAATAAAAT AGGTGAAAGA ACAGTTCAAG GCATTACCTC TTCAATATAT
ATTGATAACA GAACACTTTA TTTATTGTTA ATGTATTGGG GTATTGAAAT AGGCAATAAA
ACAAAAATTG GATATAAAGT CCCAGAATGG ATAAAAGAAG GAAATAAATT TGTAAAGAGG
GAATTTATTA GGGGATTGTT TGGTGCCGAT GGAACCAAAC CCAACATAAA AAAATACAAC
GCAAACTGTA TAAAGTTATC GTTAAGATGT GAAAAAGAAG CACTGAATAA AACAAAGATG
TTCTTTGAAG ATATTAAATG CATGTTGAAA GAATTTGATA TTGATTCAAA AATAAATGAA
AGAACCATTG ATAATAAATA TTTAATTGAG TTAATAGTTG CACCAAATGA TGAAAATTAC
ATTAAATACC TATCCAAAAT ATCCTATGCC TATGAAAAGG ACAATTTTGC ACGGATTGTT
GGAGAATATC TCAGAATAAA AAGTTATTAT AAAAATAACA TATTAAAAGA AATAGGAAAT
AATGCAATAA ATGAGATAAA AACAACTGGA AACAGCATTC GAAAAACTGC AAAAAAATAT
GAGGTATCGG TTGATTTTGT ATTAAATCAG ATGAAAGGCA AAAAAATAGG TTTGCCAAGA
GACTATATGA CTTATGAACA GTTTATAGAT AAAGTAGTAG ATAATAAATA TGTATCGGAG
AAAATAATAA AAAAAGAATA CATTGGACAC AAGGATGTTT ATGATATTAC CTGTCATAAT
GACCATTCAT TTATTGCCAA TGGATTTGTA TCCCATAATT GCAACTATCC GAGCCGAATA
ATCCCCCCAA TTCAATCAAG ATGTGCCATA TTCAGGTTTT CACCATTGAA AAGAGAAGAT
ATCGTAAAAA AACTAACTGA AATAGCCCAA AATGAAAATA TTGTTATAAA AGATAGTGGT
ATAGATGCCA TAATTTATGT ATCAGAAGGA GATTTAAGAA AAGCCATAAA TGTTCTACAA
ACTGCATCAA CAGTTTCAAC CACAATAGAC GAAGAGATAG TTTATAAAGT ATCCTTTAAA
GCAAGACCCG ATGAAATTAG AAAAATGATT CAATTATCTT TAAAAGGTAA ATTTATGGAA
GCCCGGGAGC TCCTATATAG TTTAATGATA GATTGGGGAA TGAGTGGAGA AGATATTGTT
GTGCAGATAT TTAGGGAGCT CCCTAATTTA GATATTGAAG AAAAAAATAA GGTAGTTCTT
GCAGAATATA TTGGAGAATG TGATTTTAGA ATGGTAGAAG GAGCAAATGA AAGAATACAA
TTAAGTGCTT TATTGGCCAA AATTGGGATA CTTGATGAAA ATGCCCATAG TTATAAAATA
TAA
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| Protein sequence | MEKPWVEKYR PKTLNEITGH DAIITRLKNY VEKESLPHML FSGPPGLGKT TSALCLAKDL
YGDTWKDNFL ELNSSDERGI DVVRTKVKNF ARTKPIGDAP FKIIFLDESD ALTSDAQNAL
RRTMEKYSDI CRFILSCLTE NAKIYTADER ELKISDYLKL FEERKIKTVL NRNGEDLVLA
GVKYNSEMVG HPVYKITLES GRTIEATEDH KFLTNNRWMK ISQLNEGDEL LIYPTLEGVE
YKEDSRKIIN LKDFYNFLEE IELQGNYKRL GEADEFSQLT TKDKEVILNR ALELYAKLHE
GLTDRECEIL NSIPEEGISR EELQKTVGLS RGRLNQILQN IENKKYINRN INKSKKTQFI
KNTSKNSPII LRNIMDIKRI IEREHNIKIS YTAFKKLLNH GVKGFAQNHI KNIKERNWDS
ITYDSKNAGM FARLVGFIIG DGHLAKTEEK RIVITSTNNE LKQIINDLTE LNIKCSGIIE
KEITNKIGER TVQGITSSIY IDNRTLYLLL MYWGIEIGNK TKIGYKVPEW IKEGNKFVKR
EFIRGLFGAD GTKPNIKKYN ANCIKLSLRC EKEALNKTKM FFEDIKCMLK EFDIDSKINE
RTIDNKYLIE LIVAPNDENY IKYLSKISYA YEKDNFARIV GEYLRIKSYY KNNILKEIGN
NAINEIKTTG NSIRKTAKKY EVSVDFVLNQ MKGKKIGLPR DYMTYEQFID KVVDNKYVSE
KIIKKEYIGH KDVYDITCHN DHSFIANGFV SHNCNYPSRI IPPIQSRCAI FRFSPLKRED
IVKKLTEIAQ NENIVIKDSG IDAIIYVSEG DLRKAINVLQ TASTVSTTID EEIVYKVSFK
ARPDEIRKMI QLSLKGKFME ARELLYSLMI DWGMSGEDIV VQIFRELPNL DIEEKNKVVL
AEYIGECDFR MVEGANERIQ LSALLAKIGI LDENAHSYKI
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