Gene Maeo_1169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaeo_1169 
Symbol 
ID5326828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus aeolicus Nankai-3 
KingdomArchaea 
Replicon accessionNC_009635 
Strand
Start bp1228161 
End bp1229225 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content31% 
IMG OID640788572 
ProductL-seryl-tRNA selenium transferase 
Protein accessionYP_001325358 
Protein GI150401592 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] 
TIGRFAM ID[TIGR03576] pyridoxal phosphate enzyme, MJ0158 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.497392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAT TAAAAAGGAT AAACAAAACA AGAAAAATAA TAAGAAAAAT AATAAATGAA 
AAGGGAAGAA AGGAGATATA TGATTTAACT GGATTATCGG GAGGATTCGA AATATCTGAT
TCAGACATGG AGCTCCTTGA AACATATGTA GGTCCAGCAA TATTCTCAGA GCAATTAAAT
GCCGTTGGAA TAAGTCATTT CGGAGGGAGC CCATCTATCC ATAAAGCCGT TGGTTTTAAT
AGAACTTCTT CAGCCATATT CTCCACGATT TGTGCATTAT CCAAGGATAT TAAAACAGTG
GTGCATTTTG TTCCAAAATT ACCGTCCCAT CCATCTATCC CGCGAAGTTG CGACATATTT
GATATGAATT ATTTTGAAAG CGATAATTTA CAGGAAATGT TAAATAAAAT AGACGGTGAA
ACCCTAACTA TTATCACTGG AGCTACAATG GACCATAAAA TGATAAATTT AGATGATTTA
AAAGAAATAA TACAATATTG TAAAGAAAAA AACAGCATTG TATTTGTAGA TGATGCATCT
GGTGCAAGAT TAAGATTGCT TTATAACCAG CCACCAGCTC TAAAAATTGG TGCTGATTTG
GCGGTTTCAA GCACGGACAA ATTAATGAAT GGTCCAAGGG CAGGATTATT AAGTGGTAAA
AAAGAATTAA TTGATAAAAT ATATTCCGAA GGACTTAAAT ATGGTTTAGA AGCTCAGGCC
CCAATATTAT GTGCTATGAT AAATGCTTTA AAAAATTTTA AATTAGATAA TTTAAAGGAC
GCCTTAAAAA GAGCAAAAAA CATAGATTTA TCCTCTTTGG TAAATGCAGG ATTGAAATAT
GAAAAAACCC CAACTGGATT TATTATTACA AATTTATCCG ATGAAGAATA TATAAACATT
GCTTTAAAAA TGCTTGAAAA TTATGGAATA ATAACCATCA CCGCAGGAGG AATGCCTGGA
GCAAGTAAAA CTCTTAGAAT TGATTTTTGC TCAAAAGATG CTAAAAGAAT ATCTGACGAA
TATGTCATTA ACGCAATTAT TAATTCAAAA AATAATAATT TATAA
 
Protein sequence
MSELKRINKT RKIIRKIINE KGRKEIYDLT GLSGGFEISD SDMELLETYV GPAIFSEQLN 
AVGISHFGGS PSIHKAVGFN RTSSAIFSTI CALSKDIKTV VHFVPKLPSH PSIPRSCDIF
DMNYFESDNL QEMLNKIDGE TLTIITGATM DHKMINLDDL KEIIQYCKEK NSIVFVDDAS
GARLRLLYNQ PPALKIGADL AVSSTDKLMN GPRAGLLSGK KELIDKIYSE GLKYGLEAQA
PILCAMINAL KNFKLDNLKD ALKRAKNIDL SSLVNAGLKY EKTPTGFIIT NLSDEEYINI
ALKMLENYGI ITITAGGMPG ASKTLRIDFC SKDAKRISDE YVINAIINSK NNNL