| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_1141 |
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| Symbol | |
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| ID | 5327666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus aeolicus Nankai-3 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009635 |
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| Strand | - |
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| Start bp | 1185462 |
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| End bp | 1190459 |
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| Gene Length | 4998 bp |
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| Protein Length | 1665 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640788540 |
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| Product | DNA polymerase II large subunit |
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| Protein accession | YP_001325330 |
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| Protein GI | 150401564 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1933] Archaeal DNA polymerase II, large subunit |
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| TIGRFAM ID | [TIGR00354] DNA polymerase, archaeal type II, large subunit
[TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTCATG TGAAAGCATC AAAGGAAATG GAATTTTATT TTAATAATAT TTTAGAAAAT
GTTAAAGAAA TTTACAATAT TGCTGAAAAA TGCAGAAATA AAGGATATGA TGTAAATAAT
TATGTAGAAA TACCACTTGC TAATGATATG GCAGACAGGG TTGAGGGAAT TGTAGGTCCA
AAAAATGTAT CTGGTAGAAT AAGGGAATTA GTTATAGAAT TGGGTAAAGA GCCAGCTGCT
CTTGAAGTGG CAAAAGAAAT TGTTGAAGGA AAATTTGGAA CAGACTCTCC CGAAGTATTG
GCGGAACAGG CAGTAAGAAC AGCGTTAGCT ATAATTACAG AAGGAATTGT TGCAGCCCCT
CTTGAAGGTA TTGCAGGGGT AAAAATAAAA ACCAACAAAG ATAATAGTAA ATATTTAGCA
ATATATTTTG CAGGACCTAT TAGAAGTGCA GGAGGTACAG CTCAGGCATT GGCGGTATTA
GTCGGAGATT ATGTTAGAAA AAATATGGGA TTAAATAAAT ATATCCCAAG CGAAGATGAA
ATAGAACGAT ATGTTGAGGA AGTGGATTTA TACCAATCAG AAGTCGGAGG TTTTCAATAT
TCTCCATCAC CTGATGAGAT ACGGACCGCT GTAAAAAATA TATCCATAGA AATTACTGGG
GAGACTACCG ATGATGTGGA GGTTAGTGGC CATAGGGATT TGGATAGAGT AGAAACAAAT
TGTATACGGG GTGGAGCTCT CCTTGCACTT GTAGAGGGTG TGCTGTTAAA ATCTCCAAAA
ATTTTAAGGC ATGTTGATAA ACTTGGTATG GAAGGATGGG ATTGGTTAAA ACAATTAAAG
GAAAAAAAGA AAGATGAGGA TGAGGAAAAA TCTGATGAAT TAAAAGGCGA AGACGAAAAC
ACCGAATTTA CCGATGAAGA ATTAGAGGAA TATCATAAAA TATATGATGA TGTGGAGATT
GAAGCAGTAA CTAAGTTTAT AGGGGATGTA ATTGCGGGAA GACCTGTTTT TGCGCATCCT
TCCACAAATG GAGGATTTAG GTTAAGATAT GGTAGAAGTA GAAATACAGG TTTTGCAACA
GATGGATTTC ACCCTGCCCT TATGTATCTT GTAGATGAAT TTATGGCAAT TGGAACGCAG
TTAAAAACTG AAAGACCGGG AAAAGCAACC TGTGTTGTTC CAGTAGATAG CATTGAACCA
CCAATCGCAA AATTAAAAAA TGGGACGGTA TTAAAAATAG ATACAATCGA AAAAGCAATA
GAATACAGGA AATCAGTTGA AGAAATATTG TTTTTAGGAG ATATACTTGT AAATTATGGG
GATTTTTTGG AGAATAACCA TAATCTTGTT CCATCTAGTT GGTGCGAAGA ATGGTATGAA
AAAATATTAA TTTCAAAAAA CATAAAATAT ACCGATGAAT TTATAAATAA TCCAACTCCC
AAAGAAGCTA CGATATATGC ATTAAACACA AACACGCCAC TACACCCAAA ATATACCTAT
TATTGGCATG ATGTATCAAA AGAGGACATA TTACAGTTAA GAAATTGGTT ATTAACTGGA
AAAGAAGAAA TAATTGATAA TAATAATAAT AATAATAATA ATAATAATAA TAATTTTGAT
GCCATTAATA GCAGTTGGAA AATACAATAC AACAATAAAG ATGAAAACAA TATAAAATCA
AAAAGAATAT TAGAATTAAT TGGATGCCCC CACGATGTAA TTTATTCTGA AAATAAAGAA
CAATATATAA TCATAGACGA ATATTATCCT TTATTATATT CATTGGGGTA TGATATTGAA
AATAATAAGG ATTTATTAGA AAATCAAAAT TTAGAAGAAA AATGTCAAAA ATCAAAAAAT
CCAATACATT TTATAAATTT GCTTTCGCAA TTTGAAATAA AAAGAAAGGC ATACATTTAC
ATCGGTGCAA GAATGGGGCG ACCAGAAAAA GCAGCCCCTA GAAAAATGAA GCCACCAGTA
AATAGTTTAT TCCCGATAGG TAATGCAGGG GGCGTAGTTA GGCTAATAAA TAAAGCGGTG
GAAACAAATA CCACAGACAA TATTGAATTA TATTCTGGAA TTTGCCCAAA TTGTGGTAAG
TTGGGATTAT ATAATAAATG TCTATTCTGT GGAGCTCCTG TAAAATTATC GGGACCAACT
ACCGTGGAGC TCCCAATAAA AGATTATTGG TATAAGTCAT TAGAAAATTT AAAAATAAAT
AAGCCCGGAA ATGTAAAATG TATTAAAGGT ATGACATCAA AGGACAAAAT AGTTGAACCC
CTTGAAAAAG GAATATTGCG GGCAGTAAAT GATGTATTTG TATTTAAAGA TGGAACTCTT
AGATATGATT GCACCGATGT TCCATTAACT CATTTTAAAC CCTCGGAAAT AAATATATCA
ATAGAAAAAT TAAAAGAATT AGGATATGAT AAGGATATAC GAGGAGCTCC CATAGAACAC
CCCGACCAAA TAATTGAATT AAAAATTCAA GATGTTATTA TTCCAAATAA TTGTGCCGAA
TATTTTATTA GGGCTACAAA GTTTATCGAT GATTTACTTG AAAAATTTTA TAAAAAAGAT
AGATTTTACA ATGTAAAAGA AAAAGATGAT TTAATTGGGC ATTTAGTAAT AGGAATGGCA
CCACACACCT CCGCAGGAAT GGTTGGTAGG ATAATAGGAT ATTGTAATGC CTATGTTGGT
TATGCCCATC CATATTTCCA TGCCTCAAAG AGAAGAAATT GCTTCCCCCC AAATACAACT
ATATTGGTAA ATATTAACGG AGAAGTAAAA AGAATTACAA TTGAGGAGCT TTACAACCTA
TACGATAATG AATATTACAA AAATATGGCA TATATTAAAA AAGACATTAA AAATAACAAT
AACATCAAGG TTTATTCTTT TGATACATTA AATAAAAAAA TGGTTTTAAC AGATATTGAG
GAAGTTTTAA AAATACAATC TCCAAACCAT CTTGTGAATA TAGGACTTGA CACAGGAAGA
AGTTTTGAAA CCACACCAGA CCATCCAGTA ATGGTATATG ATGAAAAAGA GGATAAATTT
ATAAAAAAGA ATGCAATGGA TGTTGAAGAA AACGACTTAA TGTTAATTCC AAAATTGGAT
TTTGAGGAAG ATGAAGAGCA AGAGCAAGAT AATATTGAAC ATATCGATTT GTTGGCGGAG
CTCTCAAAAG AAGAGTATAA AAATATGTGG GAGCTCCTAA GAATTAGGGG AATATCTGAT
TGGATAAAAA ATAATATTCA AAAGCACTGT TTAAAAGAAA AAAATGAGAA TGGAAAAGAA
AACCTGATTA AAAATATTGC CAAATATATA AAACAAGACA CAATACCATT GAATTTACTG
TTAAAAATAT TAAAAAATGC AGAATTAAAT ATAACTGATG TTCCAAAGGA CGCATTTATT
GCAGTAAGGC GAGATAAAGT AAATATAAGA AGAATTATCA AAATCGAACC GTTATTAAAA
ATAATTGGTT ATTATTTGGC AGAAGGATAT ATGAGGAAAA CCAGTAGCGT TTATCAAATA
AACTTCTCAA ATTACGATGA GGAAGTAATT AAAGATATTA AAAATTCATT AAATGAGGCA
TTTGGAGATG GATTTGGAAT ATATGAAAAA GATGGAAAAA TAACCGTTGG TTCAAGAATA
ATATATTTAT TATTCACAGA GATATTGAAG ACAGGAATAA ATGCACATAA TAAAAGAGTG
CCTTCATTCA TATTCAAACT TCCAAAGGAA AAAGTTAAAT TAATGCTTTC AGCATACTTC
ACAGGAGATG GAAGTGCCGT AAAAACAAGA CCTATTGTAG TAATATATAG TGCAAATAAG
AAATTATTGG AAGATATTGA TACATTAATG ATATCAAAAT TTGGACTGTA TGGGAACTGG
GGCGCGGATA AAAATGCAAA TGGAAGAAAA GGAAATGTTG TAATGAAATA TCATGAAAAA
AGAGAAACTG AAATTCCAAA ATCGACAGTT TATAGAATTG ATTATAATGG AATACAGGCA
ATGAAATATT TTGAAAATAT AGGATTTACA TCTTCTAAAA AACAAAATAT CTATGAATTA
CATACACATA AGAATTTTAA AGCGAAAAAA GGCTTAAAAG AATATGGTTA CATTGTTAAG
GTTAGGAATA AGTCCATCAT CAAAGCAGAA GATGAATTTG TATATTCTCT AAACGCAAAA
AAATATCATA ATGTGGTTAT AAATTCAAAT ATTCAAATGC ACAATTGTGA CGGCGACGAA
GACGGAATTT TCTTGCTTTT AGACGCATTT CTGAACTTTT CCAAACGATT TTTGCCAGAT
AAAAGGGGAG GACAAATGGA CGCACCACTG GTATTAACCA CATTGTTAGA CCCAAAAGAG
GTAGATGGAG AGGTGCATAA TCTTGATACT ATGTGGGAGT ATCCTTTGGA ATTTTACGAA
AAAACTCTTG AAATGCCAAC TCCAAAAGAT ATAAAGGAAT TGATTGAAAC AGTTGAAGAT
AGGTTGGACA AACCATCCCA ATATGAAAAA TTGGGATATA CTCATGAAAC CACAGATATT
AGCAATGGGC CATTGATATG TGCATATAAA ACATTGGGCT CAATGCTTGA AAAAACAGAT
GCTCAATTAA CCGTTGCAAG AAAAATACGG GCAACCTATG AACGAGATGT GGCCGAGAAG
GTAATTCAAT CCCACTTTGT GCCTGATTTA ATTGGTAATT TAAGGGCATT TTCTAGGCAG
GGATTTAGAT GTAAATGCGG GGCAAAATAC AGACGAGTCC CTTTAAAGGG AGTATGTAGA
AAATGTGGAA GTAAATTAAT ATTGACAGTT TCAAAAGGAG CAGTTGAGAA ATATATGGGC
GTATCTCAAA CAATGGCTGA AAAATACAAT GCAAGTGATT ATGTAAAACA GAGATTGGAA
TTAATAAAAG AAGGTATTGA TAATTTATTC CAAAGTGATA AAAGAAAACA GGTGAAAATA
GAGGATTTCT TTAAATAA
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| Protein sequence | MVHVKASKEM EFYFNNILEN VKEIYNIAEK CRNKGYDVNN YVEIPLANDM ADRVEGIVGP
KNVSGRIREL VIELGKEPAA LEVAKEIVEG KFGTDSPEVL AEQAVRTALA IITEGIVAAP
LEGIAGVKIK TNKDNSKYLA IYFAGPIRSA GGTAQALAVL VGDYVRKNMG LNKYIPSEDE
IERYVEEVDL YQSEVGGFQY SPSPDEIRTA VKNISIEITG ETTDDVEVSG HRDLDRVETN
CIRGGALLAL VEGVLLKSPK ILRHVDKLGM EGWDWLKQLK EKKKDEDEEK SDELKGEDEN
TEFTDEELEE YHKIYDDVEI EAVTKFIGDV IAGRPVFAHP STNGGFRLRY GRSRNTGFAT
DGFHPALMYL VDEFMAIGTQ LKTERPGKAT CVVPVDSIEP PIAKLKNGTV LKIDTIEKAI
EYRKSVEEIL FLGDILVNYG DFLENNHNLV PSSWCEEWYE KILISKNIKY TDEFINNPTP
KEATIYALNT NTPLHPKYTY YWHDVSKEDI LQLRNWLLTG KEEIIDNNNN NNNNNNNNFD
AINSSWKIQY NNKDENNIKS KRILELIGCP HDVIYSENKE QYIIIDEYYP LLYSLGYDIE
NNKDLLENQN LEEKCQKSKN PIHFINLLSQ FEIKRKAYIY IGARMGRPEK AAPRKMKPPV
NSLFPIGNAG GVVRLINKAV ETNTTDNIEL YSGICPNCGK LGLYNKCLFC GAPVKLSGPT
TVELPIKDYW YKSLENLKIN KPGNVKCIKG MTSKDKIVEP LEKGILRAVN DVFVFKDGTL
RYDCTDVPLT HFKPSEINIS IEKLKELGYD KDIRGAPIEH PDQIIELKIQ DVIIPNNCAE
YFIRATKFID DLLEKFYKKD RFYNVKEKDD LIGHLVIGMA PHTSAGMVGR IIGYCNAYVG
YAHPYFHASK RRNCFPPNTT ILVNINGEVK RITIEELYNL YDNEYYKNMA YIKKDIKNNN
NIKVYSFDTL NKKMVLTDIE EVLKIQSPNH LVNIGLDTGR SFETTPDHPV MVYDEKEDKF
IKKNAMDVEE NDLMLIPKLD FEEDEEQEQD NIEHIDLLAE LSKEEYKNMW ELLRIRGISD
WIKNNIQKHC LKEKNENGKE NLIKNIAKYI KQDTIPLNLL LKILKNAELN ITDVPKDAFI
AVRRDKVNIR RIIKIEPLLK IIGYYLAEGY MRKTSSVYQI NFSNYDEEVI KDIKNSLNEA
FGDGFGIYEK DGKITVGSRI IYLLFTEILK TGINAHNKRV PSFIFKLPKE KVKLMLSAYF
TGDGSAVKTR PIVVIYSANK KLLEDIDTLM ISKFGLYGNW GADKNANGRK GNVVMKYHEK
RETEIPKSTV YRIDYNGIQA MKYFENIGFT SSKKQNIYEL HTHKNFKAKK GLKEYGYIVK
VRNKSIIKAE DEFVYSLNAK KYHNVVINSN IQMHNCDGDE DGIFLLLDAF LNFSKRFLPD
KRGGQMDAPL VLTTLLDPKE VDGEVHNLDT MWEYPLEFYE KTLEMPTPKD IKELIETVED
RLDKPSQYEK LGYTHETTDI SNGPLICAYK TLGSMLEKTD AQLTVARKIR ATYERDVAEK
VIQSHFVPDL IGNLRAFSRQ GFRCKCGAKY RRVPLKGVCR KCGSKLILTV SKGAVEKYMG
VSQTMAEKYN ASDYVKQRLE LIKEGIDNLF QSDKRKQVKI EDFFK
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