| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_0756 |
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| Symbol | |
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| ID | 5327206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus aeolicus Nankai-3 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009635 |
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| Strand | + |
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| Start bp | 777782 |
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| End bp | 778990 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640788147 |
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| Product | tRNA pseudouridine synthase D TruD |
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| Protein accession | YP_001324951 |
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| Protein GI | 150401185 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.476979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTAA ATTTAAATTG CTATTTGCTT AATTTAAAAA TAGATGGAGT CATGAAAAAA
TATCCTGAAG ATTTTATAGT TGAAGAAATA ACTCCAGAAG GGATAGTTTT GGAAGCTGGA
AAAGACATAG GATTTAAAGA GGAAAATAAA CATGATTGGA ATGGTTCATT TATCCATTTT
ACGATGGAAA AAATAAACTG GAATACTATG GACGCTATAA GGGAGTTGGC AAGAAGAACA
AAAACTAAAC GGAAAAATTT TGGTTTTGCT GGAACAAAAG ATAAATTTGC CTTAACTACT
CAAAGAGTAG GCTGTTTTGG CATAAAACCA GAGAAACTTG AAGAGATAAA AAACTCCATC
AAAGATATAA CCATAAGAGA CATTCAAAAA ACAAACATAA AATTAAGAAT GGGCCATTTA
TGGGGCAATA AATTTACAAT AAAAATAAGA TTAAATGAAA CCGATAAATA TTATAATGAT
ATTTCTAAAT ATGAAGAAAT ATTGAAAAAT AAAAATTTAG ACTATATTTT AAATTACTAT
GGAACTCAAA GATTTGGAAC ATTCCGACCC ATTACGCATA TTGTGGGTAA ATTTATATAT
AATCGGGATT TTGAAAGTGC TTTTTATACA TACTGTGGAG CTCCAATAAA TGAAACAGGC
GTTGTAAAGG AAGCTCGAGA GATGGTAGAT AATGGAGAAT TTGAGAAGGC TTTAAAATTA
TTCCCTAAAA AAAGTTATTA TAATGAAATA AAAATGATAA GACACTACAT TAAAACAGGG
AATTATAAAG AATGTTTTAA AGTATTACCT CCACAATTAA GTAGTATGTT TGTAAATGCA
TATCAATCAT ATTTATTCAA TGAAATGATA AATATTAGAC ATAGGGATTA TTCATTTGAT
ATTCTTGATG GAGATGTGGT GGAGGAGGGA GCTCCCACAG GGAATATACT TGGTAGTGAT
ACAATATTAA GTGATGGAAT TCAAGGAGAT ATTGAAAAAT ATATTATTGA AAAAGAAAAT
CTTGATTTAA AAAAGTTTAA AATTGAAGAT TATGGAAACT TCCCTGGAAC TCGCCGAAAA
TTAATCACAA AAATTTATGA TTTTGAAAGT TCAATAGATA AAGACAATAA TATAATCTCC
ATATCATTTA AAATGGAGCG AGGAAATTAT GCTACGGTTG TATTGAGAGA AATCATATCT
GAGATTTAA
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| Protein sequence | MPLNLNCYLL NLKIDGVMKK YPEDFIVEEI TPEGIVLEAG KDIGFKEENK HDWNGSFIHF
TMEKINWNTM DAIRELARRT KTKRKNFGFA GTKDKFALTT QRVGCFGIKP EKLEEIKNSI
KDITIRDIQK TNIKLRMGHL WGNKFTIKIR LNETDKYYND ISKYEEILKN KNLDYILNYY
GTQRFGTFRP ITHIVGKFIY NRDFESAFYT YCGAPINETG VVKEAREMVD NGEFEKALKL
FPKKSYYNEI KMIRHYIKTG NYKECFKVLP PQLSSMFVNA YQSYLFNEMI NIRHRDYSFD
ILDGDVVEEG APTGNILGSD TILSDGIQGD IEKYIIEKEN LDLKKFKIED YGNFPGTRRK
LITKIYDFES SIDKDNNIIS ISFKMERGNY ATVVLREIIS EI
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