Gene Maeo_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaeo_0397 
Symbol 
ID5327620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus aeolicus Nankai-3 
KingdomArchaea 
Replicon accessionNC_009635 
Strand- 
Start bp412357 
End bp413385 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content35% 
IMG OID640787788 
ProductGDP-mannose 4,6-dehydratase 
Protein accessionYP_001324595 
Protein GI150400829 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGG CAATTATTAC GGGAATAACC GGACAGGATG GATACTATTT AACAAAATTA 
CTTTTGGAAA AAGGATATGA AGTTCATGGA ATTGTTAGAA GAAATAGCCA AAATTCCTTG 
GGAAACTTGG AACACCTACC AAAGGAAGAA TTGGAACAAA TAAATATTCA CTGGGGGGAT 
ATTACAGACA ATTTATTCAT GGATAATGTT GTTAAAGCGG TGCAACCTGA TGAAGTTTAT 
CATTTAGCTG CTCAAAGTTT TGTTGGATTC TCTTTTGAAA ATCCAAGATT TACCTATGAT 
GTTAATATTG GTGGAACTTT AAATGTAACT AATGCAGTAA AGGAATATGC ACCATCTTCA 
AAACTCTATT TTGCTGCAAC ATCTGAATTG TATGGAAAGG TTCAGGAAAT TCCGCAGAAG 
GAAACTACAC CATTTTACCC AAGGAGCCCT TATGGGGTTT CCAAGTTGGC AGGATTTTGG 
ACTATTAAGA ATTATAGGGA AAGCTATGAC TTATTTATGA GCAATGGTAT CCTGTTCAAT 
CACGAGAGCC CCATGCGTGG CCCAGAATTC GTAACAAGAA AAATAACAAT GGCTGTTGCT 
AAAATATCTC ATGGATTACA GGATTTTGTT GAATTAGGAA ATTTAAGTGC TAAAAGGGAT 
TGGGGTTATG CTGGAGATTA TGTTTATGGC ATGTGGAAAA TATTACAGCA CGATAAGCCA 
GATGACTTTG TTTTAGCAAC AAATGAAACC CATACAGTTA GGGAATTTGT TGAAAATGCC 
TTTAAGGTTG TTGGAATCGA CATAGAATGG GAAGGGGAAG GAGTTAATGA AATTGGTAAA 
GATGCTAACA ATGGAAAGGT TTTGGTAAAA GTTAATCCTG AATTTTTCAG ACCTGCGGAA 
GTTGATATAT TAATTGGTGA TTATTCAAAG GCTAAGAAGG AGCTCGGATG GGAACCAAAA 
GTTAAATTTG AAGAATTAGT TAAGATGATG GTTGAAAAGG ATTTGGAAAG AATTGGGAAA 
TTGAAATAA
 
Protein sequence
MKKAIITGIT GQDGYYLTKL LLEKGYEVHG IVRRNSQNSL GNLEHLPKEE LEQINIHWGD 
ITDNLFMDNV VKAVQPDEVY HLAAQSFVGF SFENPRFTYD VNIGGTLNVT NAVKEYAPSS 
KLYFAATSEL YGKVQEIPQK ETTPFYPRSP YGVSKLAGFW TIKNYRESYD LFMSNGILFN 
HESPMRGPEF VTRKITMAVA KISHGLQDFV ELGNLSAKRD WGYAGDYVYG MWKILQHDKP 
DDFVLATNET HTVREFVENA FKVVGIDIEW EGEGVNEIGK DANNGKVLVK VNPEFFRPAE 
VDILIGDYSK AKKELGWEPK VKFEELVKMM VEKDLERIGK LK