Gene Maeo_0285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaeo_0285 
SymbolradB 
ID5327135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus aeolicus Nankai-3 
KingdomArchaea 
Replicon accessionNC_009635 
Strand+ 
Start bp308391 
End bp309032 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content29% 
IMG OID640787679 
ProductDNA repair and recombination protein RadB 
Protein accessionYP_001324486 
Protein GI150400720 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02237] DNA repair and recombination protein RadB 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.652849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGAGG ATATTTTAAA AGGAGATATT GAAAGAAAAA CTATCACCCA AATATATGGT 
CCTCCGGGTG TTGGAAAAAC CAATTTATGC ATCATTTCTG CTATAAATTT TATAAGGCAT 
GGATATAAAG TTGCATATAT TGATACAGAG GGAGGATTAT CGACCGAAAG AATAAAACAA 
ATTTCAAATA ATAATGAAGA ATTTAATAAT ATATTAAATA ATTTAATAAT ATATGAACCT 
GAAAGCTTTG AGGAACAATC AACCATACTT AAACAACTTG CCTTAATCGA TAATTTGGGA 
CTAATTATTG TAGATGGTAT TGCATCACTT TATAGGCTAG AACTCTCCGA TGATATCAAT 
CAAAATGCAA AAGTAAATAG GATAATGGGA AACCAGATAT TAATACTAAA TAAAATATCA 
AAAAAGAACA ATTCTGCGGT TTTAATTACT AACCAAATAA CTGATACCAA TAAAGGATTT 
AAAGCATCAG GGGGTAAGAT TTTAGAATAT TGGAGTAAAA TAATAATTAG GATAGATAAA 
CCAAACACCA TAAGAGAAAT GACATTAGAA AAACATAGAC ATGCAGCAGA AGGTCAGAAA 
TTACGATATA AAATAGTCAA TAACGGCGTT CATAAATTAT AG
 
Protein sequence
MLEDILKGDI ERKTITQIYG PPGVGKTNLC IISAINFIRH GYKVAYIDTE GGLSTERIKQ 
ISNNNEEFNN ILNNLIIYEP ESFEEQSTIL KQLALIDNLG LIIVDGIASL YRLELSDDIN 
QNAKVNRIMG NQILILNKIS KKNNSAVLIT NQITDTNKGF KASGGKILEY WSKIIIRIDK 
PNTIREMTLE KHRHAAEGQK LRYKIVNNGV HKL